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Report for CCDS22446.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22446.1 Public Mus musculus 8 Inpp4b 23 108 98 CCDS HistoryNCBI Gene:234515Re-query CCDS DB by CCDS ID:22446.1Re-query CCDS DB by GeneID:234515See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22446.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000042529.13 ENSMUSP00000044466.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000042529.13Link to Ensembl Protein Viewer:ENSMUSP00000044466.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000042529Re-query CCDS DB by Protein ID:ENSMUSP00000044466
Original member Current member NCBI NM_001024617.3 NP_001019788.1 Accepted alive Link to Nucleotide Sequence:NM_001024617.3Link to Protein Sequence:NP_001019788.1Re-query CCDS DB by Nucleotide ID:NM_001024617Re-query CCDS DB by Protein ID:NP_001019788Link to BLAST:NP_001019788.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001019788.1 924 Q6P1Y8 924 100% 0 0

Chromosomal Locations for CCDS 22446.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 81741410 81741500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 81743770 81743814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 81768094 81768212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 81770808 81770924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 81856692 81856771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 81884133 81884244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 81890711 81890783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 81902726 81902873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 81952179 81952309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 81952688 81952792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 81969511 81969619 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 81985237 81985414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 81997200 81997403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 82010539 82010704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 82033057 82033229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 82034381 82034504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 82041890 82042007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 82046223 82046363 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 82048460 82048557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 82068932 82069044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 82071681 82071835 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 82121217 82121391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2775 nt):
ATGGAAATCAAAGAGGAAGGAACATCAGAAGAAGGCCAGCATTTTCTTCCTGCAGCTCAGGCAAATGACC
CTGAGGACATTCAGTTTACCAGCATCCAGAAGATTCCGAACGAGCCACAGTTGGAATTCATTCTCGCCTG
CAGGGATCTTGTGGCTCCTGTCAGTGATCGGAAACTGAATACAGTAGTCCAGATCTCAGTAATCCACCCG
GTGGAGCAGACCCTGACGAGGTACTCCAGCACAGAAATTGTGGAGGGAACAAAAGACCCACTGTTCCTAA
CGGGTGTCACATTCCCACCGGACTACCCCATCTATGAAGAGACAAGAATAAAACTGACAGTCTACGATGT
CAAGGATAAGTCTCATGATACTAGAAGCTTCCTGGGCTGTGCCAGTTTTAAAGTTGGGGAGCTGCTGAAG
TCCAAGGAGCAGCTGCTGTCCCTGAGCCTGAGAACCTCAGATGGTGGCAAAGTGGTCGGCACCATAGAAG
TCAGCCTCGTGAAGATGGGAGAGATTGAGGATGGGGACACCGACCACATCACAACAGATGTGCAGGGACA
AAAGTGTGCACTAATGTATGAATCCACAGCACCAGAAAGTCTGAGCGGGAAGGAAAACTTACCTTTTATG
AATGCAGTCTTAAGGAATCCTGTGTGTAAGCTGTATAGATTCCCCACATCTGACAATAAGTGGATGCGAA
TCCGTGAGCAGATGTCAGAAAGCATCCTTTCTTTTCATATTCCTAAGGAATTGATTTCCCTTCACATAAA
AGAAGACTTATGTAGAAACCAGGAGTTAAAAGAACTTGGTGACCTTTCCCCACACTGGGACAACCTACGG
AAAAATGTCCTTTCTCACTGTGATCAAATGGTGACTATGTACCAAGACATTCTGACAGAACTTTCCAAAG
AAACAGGGTCCTCTTTCAAATCCAGCAGCAGCAAAGGAGAGAAAACATTAGAATTTGTTCCAGTAAATCT
ACACTTGCAACGGATGCAGGTGCACAGCCCTCACCTGAAAGATGCTCTCTATGATGTCATCACTGTGGGG
GCCCCAGCTGCCCATTTTCAGGGATTCAAGAACGGTGGTCTTCGTAAACTCCTCCATAGGTTTGAGACAG
AGAGAAGGAACACCGGCTACCAGTTTATTTACTATTCACCTGAGAACACAGCGAAGGCAAAGGAAGTTCT
CAGCAGCATCAATCAGCTACAACCTCTCATAGCAACTCATGCAGACCTGCTGCTAACCTCTGCCAGCCAG
CGTTCTCCAGACAGCCTGAAGAGCTCTTTAAAGCTGCTTTCAGAAAAAACTGAGCTTTTTGTCCATGCCT
TCAAGGACCAGCTGGTCAGGAGTGCTCTTTTAGCTCTCTACACTGCAAGGCCAGGAGGCATCCTTAAGAA
GCCACCCTCTCCTAATGTCAGCACAGAGGAGAAAAGTACTCAGCATGATACCCCACAGCTTAGAAGACAA
GACTCCATACCACATCATTCTGACTATGATGAAGAAGAGTGGGATAGGGTGTGGGCCAACGTGGGGAAGA
GCCTGAACTGCATTATCGCTAAAGTAGACAAACTGATCGAGAGAGACAGTCACAACGAAGAAGGTGCTGG
AGGCAGCAGTAGCAAGGATGGAGAGGCAGACCATACCCTGGAAGATTCCATCACATCTCACCCACGTGAG
GACTGGTATGAACAGCTGCACCCACTCATCCTTACCTTGAAGGAGTGCATGGGAGAAGTGGTGAACCGAG
CAAAGCAATCCCTGACATTTGTACTGCTTCAGGAACTGGCCTACAGTCTGCCCCAGTGTTTGATGCTGAC
TCTGAGAAGAGACATTGTCTTCAGTCAGGCGCTTGCTGGATTGGTTTGTGGTTTTATCATCAAATTACAT
ACAAGTTTGCATGACCCTGGCTTCCTACAGCAGCTTCATACAGTGGGCTTGATAGTACAATACGAAGGAC
TGCTAAGTACTTACAGTGATGAAATTGGAATGCTGGAGGACATGGCAGTCGGCATTTCAGATTTGAGGAA
AGTTGCATTTAAAATAACTGAAGCCACGTCCAATGATGTCCTTCCTGTTCTCACGGGGAGACGGGAACAC
TATGTGGTGGAGGTCAAGCTTCCAGCTACAGTATTTGAGTCGCTCCCACTGCAGATTAAAGAAGGCCAGT
TGCTTCATGTGTATCCCGTTCTGTTTAATGTCGGAATCAATGAGCAGCAGACTCTGGCTGAGAGGTTTGG
AGATGTTTCTTTGCAAGAAAGTATTAATCAAGAAAATTTTGAACTTGTACAAGAATATTATTCAATATTT
ATGGAAAAGATGCCTCCTGATTATATTTCACATTTTCAAGAACAAACTGATTTAAAAGGACTGTTGGACA
ATCTCCACCAAAATATTCAAGCCAAAAAAAGAAAGAATGTAGAAATCATGTGGCTGGCAGCAACGATTTG
TCGGAAACTCAATGGCATTCGTTTTACCTGCTGTAAAAGTGCCAAAGACAGGACATCGATGTCGGTGACA
CTGGAACAGTGCTCCATCCTGAGAGACGAGCATCAACTGCACAAAGACTTTTTCATCAGAGCTTTAGATT
GCATGAGAAGCAGACAAACCCAGGGAGCCTTGAATGAATCCGATGATCCTGAGACAGGCTGCCTAACTGA
TAACAAGCCAACTTCTCGACACTTCTATCCTGTCGCCTTGCTTCTTGTCAGCTCACACCTGCTAGTTGTG
TGGCTTATTTTAAGTCTTGCATTACTCTTAGCCAAATACCAATAA

Translation (924 aa):
MEIKEEGTSEEGQHFLPAAQANDPEDIQFTSIQKIPNEPQLEFILACRDLVAPVSDRKLNTVVQISVIHP
VEQTLTRYSSTEIVEGTKDPLFLTGVTFPPDYPIYEETRIKLTVYDVKDKSHDTRSFLGCASFKVGELLK
SKEQLLSLSLRTSDGGKVVGTIEVSLVKMGEIEDGDTDHITTDVQGQKCALMYESTAPESLSGKENLPFM
NAVLRNPVCKLYRFPTSDNKWMRIREQMSESILSFHIPKELISLHIKEDLCRNQELKELGDLSPHWDNLR
KNVLSHCDQMVTMYQDILTELSKETGSSFKSSSSKGEKTLEFVPVNLHLQRMQVHSPHLKDALYDVITVG
APAAHFQGFKNGGLRKLLHRFETERRNTGYQFIYYSPENTAKAKEVLSSINQLQPLIATHADLLLTSASQ
RSPDSLKSSLKLLSEKTELFVHAFKDQLVRSALLALYTARPGGILKKPPSPNVSTEEKSTQHDTPQLRRQ
DSIPHHSDYDEEEWDRVWANVGKSLNCIIAKVDKLIERDSHNEEGAGGSSSKDGEADHTLEDSITSHPRE
DWYEQLHPLILTLKECMGEVVNRAKQSLTFVLLQELAYSLPQCLMLTLRRDIVFSQALAGLVCGFIIKLH
TSLHDPGFLQQLHTVGLIVQYEGLLSTYSDEIGMLEDMAVGISDLRKVAFKITEATSNDVLPVLTGRREH
YVVEVKLPATVFESLPLQIKEGQLLHVYPVLFNVGINEQQTLAERFGDVSLQESINQENFELVQEYYSIF
MEKMPPDYISHFQEQTDLKGLLDNLHQNIQAKKRKNVEIMWLAATICRKLNGIRFTCCKSAKDRTSMSVT
LEQCSILRDEHQLHKDFFIRALDCMRSRQTQGALNESDDPETGCLTDNKPTSRHFYPVALLLVSSHLLVV
WLILSLALLLAKYQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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