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Report for CCDS36651.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36651.1 Public Mus musculus 13 Rbm24 23 108 98 CCDS HistoryNCBI Gene:666794Re-query CCDS DB by CCDS ID:36651.1Re-query CCDS DB by GeneID:666794See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 36651.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000037923.4 ENSMUSP00000043120.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000037923.4Link to Ensembl Protein Viewer:ENSMUSP00000043120.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000037923Re-query CCDS DB by Protein ID:ENSMUSP00000043120
Original member Current member NCBI NM_001081425.1 NP_001074894.1 Accepted alive Link to Nucleotide Sequence:NM_001081425.1Link to Protein Sequence:NP_001074894.1Re-query CCDS DB by Nucleotide ID:NM_001081425Re-query CCDS DB by Protein ID:NP_001074894Link to BLAST:NP_001074894.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001074894.1 236 D3Z4I3 236 100% 0 0

Chromosomal Locations for CCDS 36651.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 46419031 46419198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 46420275 46420398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 46421851 46421905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 46428954 46429317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (711 nt):
ATGCACACCACCCAGAAGGACACGACGTACACCAAGATCTTCGTGGGAGGGCTGCCCTACCACACCACCG
ACGCCAGCCTGCGCAAGTACTTTGAGGTCTTCGGAGACATCGAGGAAGCGGTGGTCATCACAGACCGGCA
GACCGGCAAGTCCCGGGGCTACGGATTTGTCACCATGGCTGACAGGGCTGCCGCTGAAAGGGCCTGCAAG
GATCCCAACCCCATCATCGATGGTAGGAAGGCCAATGTGAATCTGGCATACTTGGGAGCAAAACCAAGAA
TCATGCAGCCAGGTTTTGCCTTTGGCGTTCAACAGCTTCACCCAGCCCTTATCCAGAGACCTTTCGGGAT
CCCCGCCCACTACGTCTACCCGCAGGCTTTTGTGCAGCCTGGAGTGGTCATTCCCCATGTGCAGCCCACA
GCAGCCGCGGCTTCCACCACACCGTACATTGATTACACTGGAGCCGCCTACGCTCAGTACTCCGCTGCCG
CAGCCGCCGCCGCAGCGGCCGCTGCCTATGACCAGTACCCCTATGCAGCATCCCCAGCTGCTGCAGGCTA
TGTAACCACTGGGGGCTACAGCTATGCTGTCCAACAGCCCATCACCGCCGCTGCGCCCGGGACAGCTGCT
GCTGCGGCTGCAGCTGCTGCAGCCGCAGCCGCCTTTGGCCAGTACCAGCCTCAACAGCTGCAGACAGACC
GAATGCAGTAG

Translation (236 aa):
MHTTQKDTTYTKIFVGGLPYHTTDASLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACK
DPNPIIDGRKANVNLAYLGAKPRIMQPGFAFGVQQLHPALIQRPFGIPAHYVYPQAFVQPGVVIPHVQPT
AAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTTGGYSYAVQQPITAAAPGTAA
AAAAAAAAAAAFGQYQPQQLQTDRMQ


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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