CCDS Home FTP Process Releases & Statistics
Collaborators EBI HGNC MGI NCBI
Contact Us email CCDS
Genome Displays Related Resources Gene HomoloGene MANE RefSeq
|
|
Report for CCDS56747.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
56747.1 |
Public |
Mus musculus |
10 |
Otogl |
23 |
108 |
98 |
|
Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68
Review status: Reviewed (by RefSeq and Havana)
Attributes |
CDS uses downstream AUG |
Inferred exon combination |
Sequence IDs included in CCDS 56747.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
|
|
EBI |
ENSMUST00000165341.4 |
ENSMUSP00000129467.2 |
Accepted |
alive |
|
|
|
NCBI |
NM_001177567.2 |
NP_001171038.1 |
Accepted |
alive |
|
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_001171038.1 |
2325 |
F7A4A7-1 |
2325 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 56747.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (6978 nt): ATGGTACCTTGGCGTGCTCTCTCCCTTCCTATACTGCTGGTTTCATTACGAGGATACGTTTGTGCGTCAT CTGTCCTGTCAGAAACATCAGAAAGTGAGTTCTATGAAAATGAACAGAGAAGGGCTCTGTTAGCAGTACA GTTTGAAGCAACCTCTCCGAGATATTTTTTCCACGAAGCTATTAATTGGGGTGAGAGTAAAATAAAAGGT TCATGTCCTCATGAATGCCTTAACGGGGCTTTCTGTTCTAAGACGGGTACGTGTGACTGTCAAATATTCC AGGCTCTCGGGACAAGGTGCCAGATTGTGCCAAACATGGGAAGTGGCAGAGATGGGATTTGCAAAACCTG GGGACAGTATCACTTTGAAACATTTGATGGAATCTACTATTATTTCCCAGGAAGTTGTTCTTATATATTT GCAAAGGACTGTGGTAATTTGGAGCCTCAGTACACAGTATGGGTCCATAATAGCCCAAAGTGCCTTGGTT CCGTGTATTCTTGTTACCGCTCCATCAGCTTATTTTTTTCAAACCAAGAGGAAATTAGAATCTATGGACA TGAAATAAGAAAAAATGGGATCAGTTTATCTCTGCCTCAGACACTTGGGCAGGTGCACTTAGAGAAGGTA GCTGACTACATTCTGGTGAAGACGACCTTTGGATTTTCTTTGGCTTGGGATGGAATATCGGGAATTTACC TCAAACTCTCGGAGGAGCACAGAGGGAAATCATGTGGCTTGTGTGCAAATTATAATGGCATCCAGTCAGA CGACTTTGTGATCCTGCAAGAGGACTACACAGAAGACATTGCTATGTTTGCAAATAGCTGGCTGGTGCTA ACTCCAGATGATACTAAATGTGTACCTACGCCCTCAGACTTTCCAAATCCATGTTCCAGTGGAATGCCAG CATTTGAGGCAATCTTCTTCAAATGCCAGATATTGTTACAGTTCCCCTTTCTGAGCTGCCACGAATACAT TGATCCATACTTATACATTGCCAGCTGTGTTAATGACCTGTGCAAAACTGATGACGATGAAACTTACTGT CGAGCAGCCACAGAGTACGCTAGAGCCTGTTCCCACGCCGGCTTCCCCATTCAAGACTGGAGGGATGACT TTCCAGCATGCACTGATAAATGTGACGATAGCTTCGTCCACCGGGACTGTATCAGTTGTTGCCCTCCGAG CTGCACATTTGAGAAGCAGTGTCTTGGGAGCAATCTTCACTGCCTTGATGGATGCTATTGTGCAGACGGC CTCATAATGGACAATGGAACTTGCATCTCTTTGGAGAGCTGCCCTTGTAGTTTTCACGGATTAGCTTATT CAGTTGGTTCAAAAATCGAACAAGAGTGCACTGAATGTGTATGTGTTGGTGGAGTTTGGAACTGCACCGA ACATGACTGTCCAGTTCAGTGTTCTGTTGTGGGTGACTCTCATTTCACCACCTTTGATGGGCGTCATTAC TCTTTTATTGGCTTGTGTCAGTACATCCTTGTGAAAGGAACTGGAAAAGATAGATTCACGATCACTTTGC AGAAGGCTCACTGTGAACAGAACCTGGGTTTGGTCTGCCTTCAGTCCATAACTCTAATACTGGAGGATGA CTTTAACAAACAAGTGACGCTCAGCAGAGGAGGCCAGATTGTCACCAGTCCCAACCAAGGCTTCACCCTG AACGGCATTGTTGAAATTCAAACCCTGTCATCCTTATTCATTCTCCTAAGAACCACCTTTGGTTTAAAGA TCTTGTTCGCTATTGATGGAGAAAGAATTTACATTCAGCTTTCCAGTGCCTGGAAAAGAAGGACATTAGG TCTGTGCGGCACCTTTAATGGCAACATTAGGGATGATTTTCTTTCTCCATCAGGCATGATCGAAGGAACC CCACAGCTCCACGCACATGCGTGGAGAGTCTCCTCCACGTGTTTCGCGCCTGTCCATGTCCCGATGGTGG ATCCCTGCAATATTAACCAACAGAACATTGGGTATGCAGCACACTGTGATGTCATCCACCAGGAGCTCTT TGCTCCTTGCCATGTCTACGTCAGTCCCGGGCTGTACTACCAGTTGTGTCGCCACGATGCCTGCAAATGT GGGAGCCCCTGCCTGTGTAACGCTCTCGCCCACTACGCCTACCTGTGTGGTCAGCGTGGTGTGCCCATTG ATTTCAGAGCTCACATCTCCTTCTGTGCTGTGGTGTGTCAGAAGGGCATGCTGTACCACCACTGCTCGTC ACTCTGCCTCCGCTCCTGCACCTCTCTCTCCTCCCCTGAGCAGTGCAAAGACGACTGTGCTGAAGGGTGC AACTGTCCTGAAGGCAAATTCTATGAAGAGACACTTAACTTTTGTGTGCCCATATATCACTGCCGGTGTC ATTATAGGGGGAGCATTTACCAGCCAGGGGAGCTCATTCCAACCCCCTCAGGCTTATGCCAGTGTTCAAA TGGGACTGTGAAATGTGATGAGCTAGCAACACCCTCTACTGTCCACGCCTGCCCAGAAGGGAAGGAATAT TTTGACTGCAGGTTTCCTGACCCTGCGTTACCAGCTGGTGGTATAAACTGCGAGACGACGTGCGCAAACC TGGCCATGAACTTCACCTGTGCTCCATCCTCGCCTTGCATCAGTGGCTGCGTTTGTGCTGCAGGAATGGC AGAACACAAAGGAAAATGCTATGTTCCCGAAAGCTGTCCCTGCATCTGGAAGGACTGGGAGTACAGCTCA GGGGAGGTCATCTCTACACCGTGTTACACCTGTGTTTGTCGGCGGGGGATGTTCAATTGCACATATTATC CATGTCCTGCAGTATGCACAGTATATGGGGACCGGCATTATCACTCCTTTGATGGATTGGAATATGACTA TATCAGCGATTGCCAAGTGTTTTTGATAAAGAGTACAGACGATTCTGATATATCTGTGATTTCCCAAAAC AAGAAATGCTTTGACAATGATATTGTTTGTTCTAAAAGTGTTTTGATATCAATTGGAGACACTGAAATAT ACCTCAATGATGCTCCTTACAAACAGAAGCGATCAGGGTTTTTCCTGGAAAGCAGACCTGAGTACCAGCT CTGGAAGGCTGGGTTCTACATAGTAATATACTTCCCGGAGGAAGATATCACCATTCTGTGGGATGAGAAG ACAACCATCCACATCAAAGTCGGGCCACAGTGGAAGAACAAGCTGGCAGGATTGTGTGGTAACTTTGACA AATGTACTTCCAATGACATGACAACATCTAATAACATTGAAGTGCGAAATGCTCAGGTGTTTGGAGACAG CTGGGCCTTAGGACAGTGTGAAGATCTTATGGAGGCCCTGAAGCCCTGCGAGGCACACCAAAACAAATTT CCCTATGCCAAGAGAGAATGTTCCATTTTGTACAGTGATGTTTTTGCTCCTTGTCGCAATGTGATTGACG TCACCTCTTTTGCCAAGAACTGCCATGAAGACACGTGTAACTGTAACCTGGGTGGGGACTGTGAATGCCT ATGTACCAGTGTGGCCGCATACGCTTACAAATGCTGCCAGGAAGGGGTGCCTGTTCACTGGAGGTCACCC ACTGTCTGTGCCCTTGACTGTGAATATTATAATCAAGGGCTTGGGGAAGGACCTTATATGCTGGCAAGTT ATGGGCAAAGTGGCCTTGTTCTTGGTGCCAATATGACCAGTAGAAGCGTTTTCTCTTTGCCCAGAAGCAA CAATCGTGGTAATTTATTTTTTATTTTTATGATCACTCCGGGCCTTTTCAAAGAGAAGACATCCTCATTG GCTCTTGTTTCCTTGGAATCTGCTGAAAGGCCCAACTACTTTCTCTATGTCCACGACAATGACACTCTTA GCTTGAAGCTGTGGCGGGCAAACTCAGAATTTCATCAGAGAGCAACATTTTTCCACCACCAAGGCCTCTG GATTCCTGGCTACAGTGCATTCGAATTATACAGCAAGAAAGGCTACTTCATCGTTTTTATGGGTTCCAGT GTCAAAGCGTCAAAATACGATGACTCGGAAGAATTCAAGCAGTCAAGTAGCTTTAGCATAGAAGAAATCC AGGCAGTGGTCCCTTACAGGAGGATGTGCGAGTGGAGATACGAACCTTGTGCTACTCCGTGTTTTAAAAC ATGCAGTGATCCAGAGGCCTTAGCCTGTACATTCCTTCCACCGGTTGAAGGATGCTTGCCATATTGCCCC AAGAATATGATCCTGGATGAGACGACTCTTAAATGTGTTCACCCAGAAGACTGCATACCACTGTTTCCAA CAGAACCAGCATTGCCACCAGACATTACCCCATCAGACATGACACCGACCCCAGGTTTGGAATGCGAGCC TCAACAATTTGATCCTGTTTATAACTGTAGCCAATATATCTGCCTTAACATGGAGTGGACCTTCTACAAC TGGTCTCTGAATTGCCCGAAGGACTTGGAAATGCCCGACTGTGGGTTCCGAGGCTGGCCTGTTCAAGTGA ATACTGATATATGCTGTCCGGAGTGGGAATGCCCCTGTCGGTGCTCCATGTTGTCAGAGTTGAGCATCAT TACATTTGATGGGAACAGTGCAGCACTATCTAGTATGGCTTCTTACATCTTAGTAAGAGTCCCCGGGGAA ATTGTAGTTGTTCACATTGACAAATGTTCCATGAATCAGAATGGACATGCCCTTAAAAAACCAGCTTCTT TTGGACGAATCTCAGGACTTTGTTTTAAGAAGCTAAATGTGACAACATCTATACATAAAATACTTATCAA CAGAGTGGTAAGAAAGGTAGACGTGGATTCTATTGTTGTGCCTTTGCCCTTTTCAAGTCATGAGCTGTTC ATAGAAGATTCTGGAACAATGTATGTGATTACTACTCCTGCTGGCTTAATCATAAAGTGGGCTCACCTTA CAGGAATCATAGACATTCACTTCGGCCCCCAGTTTAACTTGTCATCTTACACAGAAGGGCTTTGTGGGAT TTGCAATGACAATCCAGATGATGACCTCAGGATGCAGAATGGCACCATCATTACCAACATGGAAGACATA GAGTTATTTATTGGCAGCTGGGAAATTGAGAAATCATTTGAAGTGACAATGAGAAGACCTGTGAGGAACT GTACTGAATATGACTGCAGTCATTGCATCGAGTTATTGAACAGAGAAGGTTTCATTCCATGCCATGACAA AGTCTCACCAAGGGACTTTTGTGAAAAAATGTGGATCAACTACACCTACTTCTGGAGCTACGAATGTGAT GCAATCTCTGCATATGTGGCTTTGTGCAACAAATTTGATATCTGCATTCAGTGGCGCACCCCTGACTATT GCCCTCTGAGTTGTCCAGAGGGAAAGGAATATCAGCCCTGTGTGAGACCATGTGAAGCAAGAACATGTCT CAACAAATGGTTCTATGGACACTCCTCATGTCTGAATTTGAGAGAAGACTGTGTGTGCAAGAATGGAACC ATTCTTCACCGGCCAGATAAAACACTATGCATCCCAGAGCAAGAATGTGTGTGCACTGACAGAGAGGAGC ACCCCCGCAGTGCTGGGGAGATTTGGAATGGTGGCATAGATGAATGCACCCTCTACAAATGTCTGGAGGA TGGAAACATTATTCCTATAGAGCCTGTCTGTGAAGAAGAGCCTTCCCCCATCTGTGAACGAACAGCTGAA GTGGTCATAGGCATTGTTGATAAGCTGACCTGCTGTTCTAAAAAAGTCTGTGGCTGTGACATGAGTTTGT GTGACAGGACCATCCCACCATGCACAAATAGCCAGAAGTTGATCGTTGGCTATAGTGCTCTTTCTTGTTG CCCACAGTATGAATGTGAATGTGATACGGTGAGATGTCCTGATATTTCAACGCCAGTTTGCAGAGATGAC CAGTTTGTGCTTCAAGTTCGACAGGGAGAGCCTTGCTGTTTCTACCCTTCCTGCGTTTGTAAGACATGCA CTGAACCAACTCCACAATGTACCGATGGGGAATTCCTCACTGTTAATATCAATACTACACATTTATGCTG TCCTCAGTACTACTGCGTTTGTGAGCCAGATCTTTGCCCTCCACCATCACTTGAGTGTGCAAAAGATATG AACCTGGTGAAAGAAAATGTATCTGGACAATGTTGCCCAAACTGGCGTTGCGAATGCAACTGTGAGACTC TTGTCATGCCAACCTGTGACGTGGGAGAATTTGCTGCAATAGATCAAAACTTTCAGACTGACTGTGGCTG TGTACAGTATCTCTGTGAAAAGGATGATGTGTGTGTGTTCCAAGAAGTATCAGTATTGAATCCTGGGCAA TCTCTAATAAAGTATTTAGAAGAGGAATTTTGTTATATAATCGAATGTCTGGATGAAAAAGATAACTATA CCGACTTTCATACTTTGAATGTTACAATGGTGAACTGTTCAAAAGACTGTGATGCTCACCAGATATACAT TCCATCCTCCAGTGATTATGATTGCTGTGGAACATGTAAAAATATATCCTGCAAATTTATTATGGAAAAT GGAACATCAGTTATATATGAGGAGGGGAGCACCTGGCACTATAACTGCAGCACGTACGAATGTGTTAACA CTGAGGAGGGAGCAACGATTCTAAACTACAGCATGGTTTGCCCTCCTTTTAATGAAACTGAATGCAAACT GAATGAAGGGATTGTGAAGCTTTATAATGAAGGCTGTTGCAAGATCTGCAAACGAGAAGAGCGAATATGC CAGAAAGTGATCATTAAATCCATCATAAAGAAACAGGACTGTGTAAGCCAAAGCTCTATTAGTGTGGCAT CTTGTGATGGGAAATGCCCGTCAGCTACCATATATAACATCAATGTTGAAAGTCACCTGAGGTTCTGCAA GTGCTGTCGTGAAAATGGAGTGCGAAACGTGACGGTGCCTCTGCACTGCTCAGGAAATGGCACTGAAGTA ATGTACACACTCCAGGAGCCGATAGACTGCACATGCCAGTGGAACTGA
Translation (2325 aa): MVPWRALSLPILLVSLRGYVCASSVLSETSESEFYENEQRRALLAVQFEATSPRYFFHEAINWGESKIKG SCPHECLNGAFCSKTGTCDCQIFQALGTRCQIVPNMGSGRDGICKTWGQYHFETFDGIYYYFPGSCSYIF AKDCGNLEPQYTVWVHNSPKCLGSVYSCYRSISLFFSNQEEIRIYGHEIRKNGISLSLPQTLGQVHLEKV ADYILVKTTFGFSLAWDGISGIYLKLSEEHRGKSCGLCANYNGIQSDDFVILQEDYTEDIAMFANSWLVL TPDDTKCVPTPSDFPNPCSSGMPAFEAIFFKCQILLQFPFLSCHEYIDPYLYIASCVNDLCKTDDDETYC RAATEYARACSHAGFPIQDWRDDFPACTDKCDDSFVHRDCISCCPPSCTFEKQCLGSNLHCLDGCYCADG LIMDNGTCISLESCPCSFHGLAYSVGSKIEQECTECVCVGGVWNCTEHDCPVQCSVVGDSHFTTFDGRHY SFIGLCQYILVKGTGKDRFTITLQKAHCEQNLGLVCLQSITLILEDDFNKQVTLSRGGQIVTSPNQGFTL NGIVEIQTLSSLFILLRTTFGLKILFAIDGERIYIQLSSAWKRRTLGLCGTFNGNIRDDFLSPSGMIEGT PQLHAHAWRVSSTCFAPVHVPMVDPCNINQQNIGYAAHCDVIHQELFAPCHVYVSPGLYYQLCRHDACKC GSPCLCNALAHYAYLCGQRGVPIDFRAHISFCAVVCQKGMLYHHCSSLCLRSCTSLSSPEQCKDDCAEGC NCPEGKFYEETLNFCVPIYHCRCHYRGSIYQPGELIPTPSGLCQCSNGTVKCDELATPSTVHACPEGKEY FDCRFPDPALPAGGINCETTCANLAMNFTCAPSSPCISGCVCAAGMAEHKGKCYVPESCPCIWKDWEYSS GEVISTPCYTCVCRRGMFNCTYYPCPAVCTVYGDRHYHSFDGLEYDYISDCQVFLIKSTDDSDISVISQN KKCFDNDIVCSKSVLISIGDTEIYLNDAPYKQKRSGFFLESRPEYQLWKAGFYIVIYFPEEDITILWDEK TTIHIKVGPQWKNKLAGLCGNFDKCTSNDMTTSNNIEVRNAQVFGDSWALGQCEDLMEALKPCEAHQNKF PYAKRECSILYSDVFAPCRNVIDVTSFAKNCHEDTCNCNLGGDCECLCTSVAAYAYKCCQEGVPVHWRSP TVCALDCEYYNQGLGEGPYMLASYGQSGLVLGANMTSRSVFSLPRSNNRGNLFFIFMITPGLFKEKTSSL ALVSLESAERPNYFLYVHDNDTLSLKLWRANSEFHQRATFFHHQGLWIPGYSAFELYSKKGYFIVFMGSS VKASKYDDSEEFKQSSSFSIEEIQAVVPYRRMCEWRYEPCATPCFKTCSDPEALACTFLPPVEGCLPYCP KNMILDETTLKCVHPEDCIPLFPTEPALPPDITPSDMTPTPGLECEPQQFDPVYNCSQYICLNMEWTFYN WSLNCPKDLEMPDCGFRGWPVQVNTDICCPEWECPCRCSMLSELSIITFDGNSAALSSMASYILVRVPGE IVVVHIDKCSMNQNGHALKKPASFGRISGLCFKKLNVTTSIHKILINRVVRKVDVDSIVVPLPFSSHELF IEDSGTMYVITTPAGLIIKWAHLTGIIDIHFGPQFNLSSYTEGLCGICNDNPDDDLRMQNGTIITNMEDI ELFIGSWEIEKSFEVTMRRPVRNCTEYDCSHCIELLNREGFIPCHDKVSPRDFCEKMWINYTYFWSYECD AISAYVALCNKFDICIQWRTPDYCPLSCPEGKEYQPCVRPCEARTCLNKWFYGHSSCLNLREDCVCKNGT ILHRPDKTLCIPEQECVCTDREEHPRSAGEIWNGGIDECTLYKCLEDGNIIPIEPVCEEEPSPICERTAE VVIGIVDKLTCCSKKVCGCDMSLCDRTIPPCTNSQKLIVGYSALSCCPQYECECDTVRCPDISTPVCRDD QFVLQVRQGEPCCFYPSCVCKTCTEPTPQCTDGEFLTVNINTTHLCCPQYYCVCEPDLCPPPSLECAKDM NLVKENVSGQCCPNWRCECNCETLVMPTCDVGEFAAIDQNFQTDCGCVQYLCEKDDVCVFQEVSVLNPGQ SLIKYLEEEFCYIIECLDEKDNYTDFHTLNVTMVNCSKDCDAHQIYIPSSSDYDCCGTCKNISCKFIMEN GTSVIYEEGSTWHYNCSTYECVNTEEGATILNYSMVCPPFNETECKLNEGIVKLYNEGCCKICKREERIC QKVIIKSIIKKQDCVSQSSISVASCDGKCPSATIYNINVESHLRFCKCCRENGVRNVTVPLHCSGNGTEV MYTLQEPIDCTCQWN
|