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Report for CCDS27917.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27917.1 Public Mus musculus 16 Adcy9 23 108 98 CCDS HistoryNCBI Gene:11515Re-query CCDS DB by CCDS ID:27917.1Re-query CCDS DB by GeneID:11515See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27917.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000005719.3 ENSMUSP00000005719.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000005719.3Link to Ensembl Protein Viewer:ENSMUSP00000005719.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000005719Re-query CCDS DB by Protein ID:ENSMUSP00000005719
Original member Current member EBI ENSMUST00000117801.7 ENSMUSP00000113498.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000117801.7Link to Ensembl Protein Viewer:ENSMUSP00000113498.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000117801Re-query CCDS DB by Protein ID:ENSMUSP00000113498
Original member NCBI NM_009624.3 NP_033754.2 Updated not alive Link to Nucleotide Sequence:NM_009624.3Link to Protein Sequence:NP_033754.2Re-query CCDS DB by Nucleotide ID:NM_009624Re-query CCDS DB by Protein ID:NP_033754
Current member NCBI NM_009624.4 NP_033754.2 Accepted alive Link to Nucleotide Sequence:NM_009624.4Link to Protein Sequence:NP_033754.2Re-query CCDS DB by Nucleotide ID:NM_009624Re-query CCDS DB by Protein ID:NP_033754Link to BLAST:NP_033754.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033754.2 1353 P51830 1353 100% 0 0

Chromosomal Locations for CCDS 27917.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 16 (NC_000082.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 4287898 4289089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4294663 4294704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4297409 4297557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4298687 4298846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4304377 4304585 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4307156 4307258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4311525 4311742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4312685 4312789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4323767 4323957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4417853 4419545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4062 nt):
ATGGCTTCCTCACCCCACCAGCAGCTGCTGCATCACCATAGCACCGAGGTGAGCTGCGACTCAAGCGGAG
ACAGCAACAGCGTGAGGGTCAAGATCAACCCTAAGCAGCTGTCCTCCAACACCCACCCGAAGCACTGCAA
GTACAGCATCTCCTCCAGCTGTAGCAGCTCGGGAGACTCAGGGGGCCTTCCCCGGAGGGTTGGCGGCGGG
GGTCGCCTGCGCAGACAGAAGAAGCTGCCCCAGCTTTTTGAGAGGGCCTCCAGCCGGTGGTGGGACCCCA
AATTCGACTCCATGAACCTGGAGGAGGCCTGCCTGGAGCGCTGCTTTCCGCAGACCCAGCGCCGCTTCCG
GTACGCACTCTTTTATGTGGGCTTCGCCTGCCTTCTCTGGAGCATCTATTTCGCTGTCCACATGAAATCC
AAAGTGATTGTCATGGTGGTCCCAGCTCTGTGCTTCCTGGTGGTGTGTGTGGGCTTTTTCCTGTTTACTT
TCACCAAGCTGTACGCCCGGCATTATGCGTGGACCTCGCTGGCTCTCACCCTGCTGGTGTTCGCCCTGAC
CCTGGCTGCGCAGTTTCAGGTTTGGACACCTCTGTCAGGACGTGTTGACAGCTCCAATCATACTCTCACG
GCCACTCCGGCGGACACTTGCTTATCTCAAGTAGGAAGCTTCTCCATATGCATCGAAGTGCTCCTTTTGC
TCTACACAGTCATGCAGTTACCTCTGTACCTGAGCTTGTTTTTGGGGGTGGTCTATTCTGTCCTTTTTGA
GACCTTCGGCTACCACTTCCGAAACGAAGACTGCTACCCTTCTCCGGGCCCTGGGGCCCTGCACTGGGAG
CTGCTGAGCAGAGCCCTGCTTCACGTGTGCATTCACGCTATCGGGATCCATCTGTTTGTCATGTCTCAGG
TGAGGTCCAGGAGCACCTTTCTCAAGGTGGGACAATCCATTATGCACGGCAAAGATCTGGAAGTAGAGAA
AGCCCTGAAAGAGAGGATGATTCATTCAGTGATGCCAAGAATCATAGCCGACGACTTAATGAAACAAGGG
GACGAGGAGAGTGAGAATTCCGTCAAGAGGCATGCCACCTCCAGTCCCAAGAACAGGAAGAAGAAGTCCT
CCATACAGAAGGCACCGATAGCATTCCGCCCCTTTAAGATGCAGCAGATTGAAGAAGTCAGTATTTTATT
TGCAGACATTGTGGGTTTCACCAAGATGAGCGCCAACAAATCTGCGCATGCCTTGGTAGGCCTACTCAAT
GACCTGTTCGGTCGCTTTGACCGCCTGTGTGAGCAGACCAAGTGTGAGAAGATCAGCACTCTGGGGGACT
GTTATTACTGTGTGGCAGGGTGTCCGGAGCCCCGGGCAGACCATGCCTACTGCTGCATTGAAATGGGCTT
AGGCATGATAAAAGCCATCGAGCAGTTCTGCCAGGAGAAGAAAGAGATGGTGAACATGCGTGTTGGGGTT
CACACGGGGACTGTCCTGTGTGGCATCCTGGGCATGAGGAGGTTTAAATTTGATGTGTGGTCCAACGATG
TGAACTTGGCTAATCTCATGGAGCAGCTGGGAGTGGCTGGCAAAGTTCACATATCTGAGGCCACTGCAAA
ATACTTAGACGACAGGTATGAAATGGAAGATGGGAGAGTTATTGAGCGCCTTGGGCAGAGTGTGGTGGCT
GACCAGTTGAAAGGTTTGAAGACATACCTGATATCGGGTCAGAGAGCCAAGGAGTCCCACTGCAGCTGTG
CAGAGGCCCTGCTTTCTGGCTTTGAGGTCATTGACGACTCACGGGAGTCCTCAGGCCCTAGGGGACAGGG
GACAGCATCGCCAGGGAGTGTCAGTGATTTGGCGCAGACTGTCAAAACCTTTGATAACCTTAAGACTTGC
CCTTCTTGTGGAATCACATTTGCTCCCAAATCTGAAGCTGGTGCAGAAGGAGGAACTGTGCAAAATGGCT
GTCAAGACGAGCCTAAGACCAGCACCAAGGCTTCTGGAGGACCCAACTCCAAAACCCAGAATGGACTTCT
GAGCCCTCCTGCAGAGGAGAAGCTCACTAACAGCCAGACCTCCCTCTGTGAGATCCTGCAAGAGAAGGGA
CGGTGGGCAGGGGTGAGCTTGGACCAGTCAGCCCTCCTCCCGCTCAGGTTCAAGAACATCCGTGAGAAAA
CTGATGCCCACTTTGTTGATGTCATCAAAGAAGACAGCCTGATGAAAGATTATTTCTTCAAGCCGCCCAT
CAATCAGTTCAGCCTGAACTTCCTGGACCAGGAGCTGGAGCGATCATATAGAACCAGCTACCAGGAAGAG
GTCATAAAGAATTCTCCTGTGAAGACGTTCGCCAGTGCCACCTTCAGCTCCCTTCTGGATGTGTTTCTGT
CAACCACCGTGTTCTTGATTCTCTCCATCACCTGCTTCCTAAAGTATGGAGCCACCGCCACCCCTCCCCC
ACCGGCTGCCCTGGCCGTCTTTGGTGCAGACCTGCTGCTGGAGGTGCTTTCCCTCATAGTGTCCATCAGA
ATGGTGTTTTTCCTAGAGGATGTCATGACATGCACAAAGTGGTTGCTGGAATGGATCGCTGGCTGGCTCC
CTCGCCACTGCATTGGGGCAATCTTGGTGTCTCTTCCTGCCCTGGCTGTCTATTCACACATCACCTCTGA
GTTTGAGACCAACATACATGTTACCATGTTCACTGGCTCTGCGGTGCTGGTGGCCGTTGTGCACTACTGT
AACTTCTGCCAGCTCAGCTCCTGGATGAGGTCCTCCCTTGCCACCATCGTGGGGGCTGGGCTGCTGCTTC
TGCTCCACATCTCCCTGTGTCAGGACAGTTCCATTGTGATGTCCCCCTTGGACTCAGCACAGAATTTCAG
TGCCCAGAGGAACCCATGCAACAGCTCAGTGCTGCAGGACGGCAGGAGGCCGGCCAGCCTCATAGGCAAG
GAGCTTATCCTCACCTTCTTCCTCCTGCTCCTCTTGGTCTGGTTCCTGAACCGGGAGTTCGAGGTCAGCT
ACCGGCTGCACTACCATGGGGATGTGGAGGCCGACCTACACCGCACCAAGATCCAGAGCATGAGAGACCA
GGCTGACTGGCTACTGCGGAACATCATCCCCTACCATGTGGCTGAGCAGCTCAAGGTCTCTCAGACCTAC
TCCAAGAACCATGACAGCGGGGGAGTCATCTTTGCCAGCATTGTCAACTTCAGTGAATTCTATGAGGAGA
ACTATGAGGGGGGCAAGGAGTGCTACCGTGTCCTCAACGAGCTGATCGGTGACTTCGATGAGCTCTTGAG
CAAGCCGGACTATAATAGCATCGAGAAGATCAAGACCATCGGGGCCACATACATGGCAGCCTCAGGGCTG
AACACGGCCCAGTGTCAGGAGGGTGGCCACCCACAGGAGCATCTGCGTATCCTCTTCGAGTTCGCCAAGG
AGATGATGCGCGTGGTGGATGACTTCAACAACAATATGTTATGGTTCAACTTCAAGCTCAGGGTCGGCTT
TAACCACGGACCCCTCACAGCAGGTGTCATAGGTACCACCAAGCTGCTGTATGACATCTGGGGGGACACC
GTCAACATCGCCAGCAGGATGGACACCACTGGTGTGGAGTGCCGTATCCAGGTGAGCGAAGAGAGCTACC
GTGTGCTGAGCAAGATGGGTTATGACTTTGACTACCGAGGGACCGTGAATGTCAAGGGGAAAGGGCAGAT
GAAGACCTACCTTTACCCAAAGTGCACGGACAATGGAGTGGTTCCCCAGCACCAGCTGTCCATCTCCCCA
GACATCCGAGTCCAGGTGGACGGCAGCATTGGGCGGTCTCCCACAGATGAGATTGCCAACTTGGTGCCTT
CCGTTCAGTATTCGGACAAGGCTTCCCTGGGATCTGATGATAGCACACAGGCTAAGGAAGCTCGCCTGTC
CTCTAAGAGGTCCTGGAGAGAGCCAGTCAAAGCAGAGGAAAGGTTTCCATTTGGCAAAGCCATAGAAAAG
GACAGCTGTGAAGACATAGGAGTAGAAGAGGCCAGTGAACTCAGCAAGCTCAATGTCTCAAAGAGTGTGT
GA

Translation (1353 aa):
MASSPHQQLLHHHSTEVSCDSSGDSNSVRVKINPKQLSSNTHPKHCKYSISSSCSSSGDSGGLPRRVGGG
GRLRRQKKLPQLFERASSRWWDPKFDSMNLEEACLERCFPQTQRRFRYALFYVGFACLLWSIYFAVHMKS
KVIVMVVPALCFLVVCVGFFLFTFTKLYARHYAWTSLALTLLVFALTLAAQFQVWTPLSGRVDSSNHTLT
ATPADTCLSQVGSFSICIEVLLLLYTVMQLPLYLSLFLGVVYSVLFETFGYHFRNEDCYPSPGPGALHWE
LLSRALLHVCIHAIGIHLFVMSQVRSRSTFLKVGQSIMHGKDLEVEKALKERMIHSVMPRIIADDLMKQG
DEESENSVKRHATSSPKNRKKKSSIQKAPIAFRPFKMQQIEEVSILFADIVGFTKMSANKSAHALVGLLN
DLFGRFDRLCEQTKCEKISTLGDCYYCVAGCPEPRADHAYCCIEMGLGMIKAIEQFCQEKKEMVNMRVGV
HTGTVLCGILGMRRFKFDVWSNDVNLANLMEQLGVAGKVHISEATAKYLDDRYEMEDGRVIERLGQSVVA
DQLKGLKTYLISGQRAKESHCSCAEALLSGFEVIDDSRESSGPRGQGTASPGSVSDLAQTVKTFDNLKTC
PSCGITFAPKSEAGAEGGTVQNGCQDEPKTSTKASGGPNSKTQNGLLSPPAEEKLTNSQTSLCEILQEKG
RWAGVSLDQSALLPLRFKNIREKTDAHFVDVIKEDSLMKDYFFKPPINQFSLNFLDQELERSYRTSYQEE
VIKNSPVKTFASATFSSLLDVFLSTTVFLILSITCFLKYGATATPPPPAALAVFGADLLLEVLSLIVSIR
MVFFLEDVMTCTKWLLEWIAGWLPRHCIGAILVSLPALAVYSHITSEFETNIHVTMFTGSAVLVAVVHYC
NFCQLSSWMRSSLATIVGAGLLLLLHISLCQDSSIVMSPLDSAQNFSAQRNPCNSSVLQDGRRPASLIGK
ELILTFFLLLLLVWFLNREFEVSYRLHYHGDVEADLHRTKIQSMRDQADWLLRNIIPYHVAEQLKVSQTY
SKNHDSGGVIFASIVNFSEFYEENYEGGKECYRVLNELIGDFDELLSKPDYNSIEKIKTIGATYMAASGL
NTAQCQEGGHPQEHLRILFEFAKEMMRVVDDFNNNMLWFNFKLRVGFNHGPLTAGVIGTTKLLYDIWGDT
VNIASRMDTTGVECRIQVSEESYRVLSKMGYDFDYRGTVNVKGKGQMKTYLYPKCTDNGVVPQHQLSISP
DIRVQVDGSIGRSPTDEIANLVPSVQYSDKASLGSDDSTQAKEARLSSKRSWREPVKAEERFPFGKAIEK
DSCEDIGVEEASELSKLNVSKSV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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