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Report for CCDS35735.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35735.1 Public Mus musculus 1 Ivns1abp 23 108 98 CCDS HistoryNCBI Gene:117198Re-query CCDS DB by CCDS ID:35735.1Re-query CCDS DB by GeneID:117198See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35735.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000111887.9 ENSMUSP00000107518.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000111887.9Link to Ensembl Protein Viewer:ENSMUSP00000107518.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000111887Re-query CCDS DB by Protein ID:ENSMUSP00000107518
Original member Current member EBI ENSMUST00000186745.1 ENSMUSP00000140708.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000186745.1Link to Ensembl Protein Viewer:ENSMUSP00000140708.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000186745Re-query CCDS DB by Protein ID:ENSMUSP00000140708
Original member Current member NCBI NM_001039511.1 NP_001034600.1 Accepted alive Link to Nucleotide Sequence:NM_001039511.1Link to Protein Sequence:NP_001034600.1Re-query CCDS DB by Nucleotide ID:NM_001039511Re-query CCDS DB by Protein ID:NP_001034600Link to BLAST:NP_001034600.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001034600.1 221 Q920Q8-2 221 100% 0 0

Chromosomal Locations for CCDS 35735.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 151350999 151351109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151351554 151351723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151351830 151351905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151353920 151354093 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151354634 151354759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151355167 151355175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (666 nt):
ATGATTCCCAATGGATATTTGATGTTTGAAGATGAAAATTTTATTGAATCATCTGTTGCCAAATTAAATG
CCTTGAGGAAGAGTGGGCAGTTCTGTGATGTTCGACTTCAGGTCTGTGGCCATGAGATGCTAGCACACAG
GGCAGTCCTGGCTTGCTGTAGCCCCTATCTATTTGAAATCTTCAATAGTGACAGTGACCCTCATGGAGTT
TCTCATGTGAAGTTGGATGATCTCAATCCAGAAGCTGTTGAAGTCTTGCTGAATTATGCATACACGGCTC
AGTTGAAAGCTGATAAGGAATTAGTAAAAGATGTTTATTCTGCAGCCAAGAAGCTGAAGATGGACCGAGT
CAAGCAGGTCTGCGGAGATTATTTACTATCTAGAATGGATGTTACTAGCTGCATCTCTTACCGAAATTTT
GCAAGTTGTATGGGAGACTCCCGTTTGTTGAATAAAGTTGACGCTTATATTCAGGAGCATTTGTTACAAA
TTTCAGAAGAGGAGGAATTTCTTAAGCTTCCGAGACTAAAGTTGGAGGTAATGCTTGAAGATAATGTGTG
CTTGCCCAGCAATGGCAAGTTGTATACAAAGGTAATCAACTGGGTGCAGCGTAGCATCTGGGAGAATGGA
GACAGCCTGGAGGAGCTCATGGAAGAGGTTTATTAA

Translation (221 aa):
MIPNGYLMFEDENFIESSVAKLNALRKSGQFCDVRLQVCGHEMLAHRAVLACCSPYLFEIFNSDSDPHGV
SHVKLDDLNPEAVEVLLNYAYTAQLKADKELVKDVYSAAKKLKMDRVKQVCGDYLLSRMDVTSCISYRNF
ASCMGDSRLLNKVDAYIQEHLLQISEEEEFLKLPRLKLEVMLEDNVCLPSNGKLYTKVINWVQRSIWENG
DSLEELMEEVY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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