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Report for CCDS37183.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37183.1 Public Mus musculus 15 Dbx2 23 108 98 CCDS HistoryNCBI Gene:223843Re-query CCDS DB by CCDS ID:37183.1Re-query CCDS DB by GeneID:223843See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37183.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000054244.6 ENSMUSP00000060424.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000054244.6Link to Ensembl Protein Viewer:ENSMUSP00000060424.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000054244Re-query CCDS DB by Protein ID:ENSMUSP00000060424
Original member Current member NCBI NM_207533.2 NP_997416.2 Accepted alive Link to Nucleotide Sequence:NM_207533.2Link to Protein Sequence:NP_997416.2Re-query CCDS DB by Nucleotide ID:NM_207533Re-query CCDS DB by Protein ID:NP_997416Link to BLAST:NP_997416.2

Chromosomal Locations for CCDS 37183.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 95624691 95625017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 95632278 95632465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 95640639 95640734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 95654240 95654762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1134 nt):
ATGGATGGGCCGGACACACCTTCCATCCCAGTCCTGAAAACCCTGTCCGGATCTGCAGACCGTTCCCGGA
CGCTGCCAGAGGAGCCGCTGAGGGCCAAGGACTCACCCCTCAGCCCCGATCCTGTCCGCGCCCTGTCCCT
GTCCCTTCGCACTCGCTCTCCACGGCTCCCCGGGCAGCGGGCGCGCACCATGCTGCCCAGCGCTGTGGCC
GCCCAGGCCGGAGCCTACTGGGATGTGGTGGCGTCCTCAGCACTCTTCGGCCTTCCTGCGCCCGGCTTTG
GCAGTCTGGGCAAGAGTTTCCTGATCGAGAACTTGCTGCGCGCAGGGGCCGGGCCCACGCACGCACCCCC
GCCCCCACGCCCAGCGCCCGGTCCTGAGTGTCCGCAGCTGCGGCCACTGCCTGCCAGCCCAGTGCCGCTC
AAGCTGTGCCCGGCCGGACCCTTTGGTGTGCGCTGGGCCTTCCAGATGCCCCCTGGCCGGGCTCCGGGGG
AGCGGGACAGTGCCTTCCAGCCCTCAGCCCCAGTGCCTTCCAAACCCTTTCTTCTGAGCGCCCCGCCATT
CTACTCTGCATGCTGCGGTGGGTCCTGCAGGCGCCCAGCATCCCCCACAGCTTTTTCAAGAGAAGAACAC
GGGCTGCCTTTGCTGACCCAGGACTCAAATTCCAAAGCTCGCAGGGGGATTTTACGAAGAGCTGTGTTCT
CAGAGGAGCAGAGAAAGGCTCTGGAGAAAATGTTTCAGAAGCAGAAATACATCAGCAAAACAGACCGAAG
GAAACTCGCGGTCAGCTTGGGACTGAAGGAGTCACAGGTGAAGATTTGGTTCCAGAACCGAAGGATGAAA
TGGCGGAATTCCAAAGAAAAGGAAGTACTCTCCAGTAGGTGTCTCCAAGAAGTGAGCCTTCAGGAAGACA
GGCTGGCACGGCCTGCCGTGGGCTGTCCTCCGCAGTGCCCGTCAATATGGGAAGTCTCCCAGCCACACTC
AAGTCCAAGCTGGAGGGAGGAGACTCCAGAATCTGCAGAAAGACTGACCCAGGAGAATTCAGGGGTCCTG
GAAGCAGATTCACTCCGAGGTACCTTGTATCTGTGTCCTGAGAAGGGACCTAGAGACAAGCATGGACTCC
AGAGCACCATTTGA

Translation (377 aa):
MDGPDTPSIPVLKTLSGSADRSRTLPEEPLRAKDSPLSPDPVRALSLSLRTRSPRLPGQRARTMLPSAVA
AQAGAYWDVVASSALFGLPAPGFGSLGKSFLIENLLRAGAGPTHAPPPPRPAPGPECPQLRPLPASPVPL
KLCPAGPFGVRWAFQMPPGRAPGERDSAFQPSAPVPSKPFLLSAPPFYSACCGGSCRRPASPTAFSREEH
GLPLLTQDSNSKARRGILRRAVFSEEQRKALEKMFQKQKYISKTDRRKLAVSLGLKESQVKIWFQNRRMK
WRNSKEKEVLSSRCLQEVSLQEDRLARPAVGCPPQCPSIWEVSQPHSSPSWREETPESAERLTQENSGVL
EADSLRGTLYLCPEKGPRDKHGLQSTI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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