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Report for CCDS36155.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36155.1 Public Mus musculus 11 Ccdc69 23 108 98 CCDS HistoryNCBI Gene:52570Re-query CCDS DB by CCDS ID:36155.1Re-query CCDS DB by GeneID:52570See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36155.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000055040.12 ENSMUSP00000054840.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000055040.12Link to Ensembl Protein Viewer:ENSMUSP00000054840.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000055040Re-query CCDS DB by Protein ID:ENSMUSP00000054840
Original member Current member NCBI NM_177471.4 NP_803422.2 Accepted alive Link to Nucleotide Sequence:NM_177471.4Link to Protein Sequence:NP_803422.2Re-query CCDS DB by Nucleotide ID:NM_177471Re-query CCDS DB by Protein ID:NP_803422Link to BLAST:NP_803422.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_803422.2 202 Q3TCJ8-1 202 100% 0 0

Chromosomal Locations for CCDS 36155.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 55050477 55050558 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 55051152 55051249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 55052348 55052467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 55052895 55052996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 55054972 55055045 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 55060461 55060545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 55078013 55078060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (609 nt):
ATGGGCTGCAGGCAAAGCCGGCACAGCCGCGGCAAGCGCGCAGAGAAGGTGGAAGAGACACAGACAGAAC
TCCTGGAGGCACTGGACAAAGAAGGAAGGATCCTGGAAGGAAGGCATGAGGAGGCTGGGCAAGTCCCGCA
GACATCGAATGCACAGGAGAAAGTCTCTCTTAGTGATTGCATCCAAGAGGCCAAAGCCTCGTTGCAGAAC
ACCTGTGCAAGTCATGTCTCACCACAGGAGGCCACGCAAGCCAAGATGAACAAGGTGGACGGGTCCATCC
TTAGCCGACTCTATAGAAACCACATCCAGGATTATGGGAGTCCTGGCCCATTCTGGGAGCAAGAGCTGGA
GAGTTTACACCATGTTATTGAGATGAAGAATGAACGAATTCACGAACTTGAGAAGCAGCTGTTCCTCCTG
GAGATGCTGAAAGAAAAAAATCTGATCTTAGCACTGAAAAACACCACCCTGCGGCAGGAGGTTGAGGACC
TACAATTCCAAGCTGGGAACAGGTTGACCATGTCAAGGCAGCTCCGGAAAGACCTACTTCAGGACCTTGA
AAAGGAGTCACAGAACGGCCACTGCTGCAGCAGACGGAGGAGCCACTGA

Translation (202 aa):
MGCRQSRHSRGKRAEKVEETQTELLEALDKEGRILEGRHEEAGQVPQTSNAQEKVSLSDCIQEAKASLQN
TCASHVSPQEATQAKMNKVDGSILSRLYRNHIQDYGSPGPFWEQELESLHHVIEMKNERIHELEKQLFLL
EMLKEKNLILALKNTTLRQEVEDLQFQAGNRLTMSRQLRKDLLQDLEKESQNGHCCSRRRSH


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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