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Report for CCDS19949.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
19949.1 Public Mus musculus 6 Gpr37 23 108 98 CCDS HistoryNCBI Gene:14763Re-query CCDS DB by CCDS ID:19949.1Re-query CCDS DB by GeneID:14763See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 19949.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000054867.7 ENSMUSP00000052185.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000054867.7Link to Ensembl Protein Viewer:ENSMUSP00000052185.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000054867Re-query CCDS DB by Protein ID:ENSMUSP00000052185
Original member Current member NCBI NM_010338.2 NP_034468.2 Accepted alive Link to Nucleotide Sequence:NM_010338.2Link to Protein Sequence:NP_034468.2Re-query CCDS DB by Nucleotide ID:NM_010338Re-query CCDS DB by Protein ID:NP_034468Link to BLAST:NP_034468.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034468.2 600 Q9QY42-1 600 100% 0 0

Chromosomal Locations for CCDS 19949.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 25669041 25669859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 25688113 25689096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1803 nt):
ATGCCAGCCCGGGGCGCGCCTCTCTCGCGCACATCGCGGCTGCTGCTCCTTCTGCTGTTTAAGGTTTCTG
TCTCTGCTGCCCTGAGCTTTGTCCCTGAGCCCAGGAATGGAACTTGTCTGGGGGAGAGCTGTTCCCCACT
GATCCAACGCCGCAGCAGGGATGCCCGTGGACCTGGGAATTCGGCAAAAGACGCTCTGCGAGTCCATGTG
CCCAGAGAGAAACTGGAAGCAGAGGTGAGAGGGGCGACCTCTTGGGACCTCCCACCACCCAGGGGCGGTG
ACACAGGTGTGATTGAAGAAGCGGCGGCTGCTGGGCCCTTGGGACCTCCAACCAAGCCACCAAGTGCCTG
GAGATGGAAAAGTGCCCAGGGTAAAGAACCATCCGGGCATTTGAGGAGAAGGGACCCCACGGATCCCCAA
CTCTTCTTTCCGACATCGGAGGGGGGAGAGATGAGTTCCAAGCGCGATGGGATTCCCCAGAGCAGGCAGG
AGCACAGTGTGAAAACGGAACCCAGAGATCTTTTTTACTGGCCACGAAGAACTGGACAACTCCAGGATTC
CCAACACAGGCCTTCAGCAGTACACGAAGGAAGGACCCTTGCTCCTCCAGGCAGGGCACTACCGCAAAAC
GGGTCTGCAGATGACTGGGTTCCTGACCAAGGGGGTCCACGCCGTGGAAACACCACGCGGCGCGTGAGAT
TGAAGAACCCCTTCTACCCATTGACCCAAGAATCCTACGGAGCCTATGCGGTCATGTGCTTATCTGTGGT
GATCTTTGGGACCGGCATTATTGGCAACTTGGCAGTGATGTGCATCGTGTGTCACAATTACTACATGAGG
AGCATCTCCAATTCTCTCTTGGCCAACCTGGCTTTCTGGGACTTTCTCATCATCTTCTTCTGCCTCCCCC
TGGTCATCTTCCATGAGTTGACTAAGAAGTGGCTTTTGGAAGATTTCTCCTGCAAGATCGTGCCCTATAT
CGAGGTGGCTTCTCTGGGTGTCACTACCTTCACCTTATGTGCACTGTGCATAGATCGCTTCCGGGCTGCC
ACCAACGTCCAGATGTACTATGAAATGATTGAAAATTGCTCTTCCACCACTGCCAAACTTGCCGTTATCT
GGGTTGGAGCTCTGCTTTTGGCCCTTCCGGAAGTTGTCCTCCGCCAGCTGAGCAAGGAAGATTTGGGCTT
TAGTGGCCAGGCTCCTGCAGAACGGTGTGTCATAAAGATCTCTCCTGATTTACCGGACACAATCTATGTT
TTGGCTCTCACCTATGATGGTGCAAGGCTTTGGTGGTATTTTGGCTGCTACTTTTGTCTGCCCACACTTT
TCACCATCACCTGCTCTCTAGTGACTGCTCGGAAGATCCGCAAAGCGGAGAAGGCCAGTACCCGTGGAAA
CAAGCGGCAGATCCATCTAGAGAGCCAGATGAACTGCACAGTGGTGGCTCTGACCATTTTATATGGGTTT
TGCATCATCCCTGAGAATATCTGCAACATTGTCACTGCCTACATGGCCACGGGCGTCTCTCAGCAGACCA
TGGACCTGCTCAACATCATCAGCCAGTTCCTTTTGTTTTTCAAGTCCTGTGTCACCCCCGTGCTCCTCTT
CTGCCTCTGCAGACCCTTCAGCAGGGCCTTCATGGAGTGCTGCTGCTGCTGCTGTGAGGAGTGTATCCAG
AAGTCTTCCACTGTGACCAGTGACGACAACGACAACGAGTACACCACAGAGCTGGAGCTGTCGCCCTTCA
GTACTATCCGCAGGGAGATGTCCACTTTTGCTTCTGTGGGGACTCATTGCTGA

Translation (600 aa):
MPARGAPLSRTSRLLLLLLFKVSVSAALSFVPEPRNGTCLGESCSPLIQRRSRDARGPGNSAKDALRVHV
PREKLEAEVRGATSWDLPPPRGGDTGVIEEAAAAGPLGPPTKPPSAWRWKSAQGKEPSGHLRRRDPTDPQ
LFFPTSEGGEMSSKRDGIPQSRQEHSVKTEPRDLFYWPRRTGQLQDSQHRPSAVHEGRTLAPPGRALPQN
GSADDWVPDQGGPRRGNTTRRVRLKNPFYPLTQESYGAYAVMCLSVVIFGTGIIGNLAVMCIVCHNYYMR
SISNSLLANLAFWDFLIIFFCLPLVIFHELTKKWLLEDFSCKIVPYIEVASLGVTTFTLCALCIDRFRAA
TNVQMYYEMIENCSSTTAKLAVIWVGALLLALPEVVLRQLSKEDLGFSGQAPAERCVIKISPDLPDTIYV
LALTYDGARLWWYFGCYFCLPTLFTITCSLVTARKIRKAEKASTRGNKRQIHLESQMNCTVVALTILYGF
CIIPENICNIVTAYMATGVSQQTMDLLNIISQFLLFFKSCVTPVLLFCLCRPFSRAFMECCCCCCEECIQ
KSSTVTSDDNDNEYTTELELSPFSTIRREMSTFASVGTHC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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