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Report for CCDS36914.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36914.1 Public Mus musculus 14 Slc39a2 23 108 98 CCDS HistoryNCBI Gene:214922Re-query CCDS DB by CCDS ID:36914.1Re-query CCDS DB by GeneID:214922See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36914.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000047726.11 ENSMUSP00000038707.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000047726.11Link to Ensembl Protein Viewer:ENSMUSP00000038707.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000047726Re-query CCDS DB by Protein ID:ENSMUSP00000038707
Original member Current member NCBI NM_001039676.2 NP_001034765.2 Accepted alive Link to Nucleotide Sequence:NM_001039676.2Link to Protein Sequence:NP_001034765.2Re-query CCDS DB by Nucleotide ID:NM_001039676Re-query CCDS DB by Protein ID:NP_001034765Link to BLAST:NP_001034765.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001034765.2 309 G3X943 309 100% 0 0

Chromosomal Locations for CCDS 36914.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 51893800 51893914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 51894089 51894219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 51894456 51894506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 51894899 51895531 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (930 nt):
ATGGAGGTACTACTAGGAGTAAAAATCGGCTGCCTGCTTGCTCTTCTGGTTCTCACACTGGGCTGTGGCC
TTACTCCCATCTACGTGAAATGGTTCCAGATGGATGCAGCTACAGGTCATCACCACAGGGTCCTCAGCCT
CCTGGGCTGCACCTCTGCAGGTGTCTTCTTGGGAGCAGGGTTGATGCATATGACTGCTGAAGCTCTGGAG
GGAATTGAGTCAGAAATTCAGAAATTCGTGGAACAGAATAGTACAGGAAGTAAGGGAAATTCTTCTCGTG
ATGCTGCTTCTAGTTACGTGGAGTATCCCTATGGAGAGCTCGTCATCTCCCTGGGCTTTTTCTTTGTCTT
CCTTTTGGAGTCGCTGGCATTGCAGTGCTGTCACGGGGCTGCTGGAGGATCGACAGTACAGGAAGAGGAA
TGGGGAGGGACTCATGCCTTTGGATTCCACAAGCATCCAGCGGTACCCTCACCCTCACGGGGTCCCTTGC
GCGCCCTGGTCCTTCTGCTCTCCCTGTCCTTTCATTCCGTGTTCGAAGGCCTGGCTGTGGGACTACAGGC
CACAGTGGCGGCCACCATACAGCTCTGTGTCGCTGTGCTGGCTCATAAGGGGCTTGTGGTGTTCAGTGTG
GGCCTGAGGCTGGGGAAGATCGGCACTGGACCACGATGGGCCACGTTCTGCATACTGTCACTAGCTCTCA
TGTCTCCTGTGGGCCTAGCCCTGGGGCTGACCGTGGCTGGAGGAGCCTCAGGACAAACACAGGGATTAGC
CCAGGCTGTATTAGAGGGCATAGCCGCTGGCACGTTTTTATATGTCACCTTCCTAGAAATTTTGCCCCGG
GAGCTGGCTTGTCCTGAGGCCCCTCTGGCCAAGTATAGCTGTGTGGCTGCTGGGTTTGCCTTCATGGCCC
TTATTGCTTTGTGGGCCTGA

Translation (309 aa):
MEVLLGVKIGCLLALLVLTLGCGLTPIYVKWFQMDAATGHHHRVLSLLGCTSAGVFLGAGLMHMTAEALE
GIESEIQKFVEQNSTGSKGNSSRDAASSYVEYPYGELVISLGFFFVFLLESLALQCCHGAAGGSTVQEEE
WGGTHAFGFHKHPAVPSPSRGPLRALVLLLSLSFHSVFEGLAVGLQATVAATIQLCVAVLAHKGLVVFSV
GLRLGKIGTGPRWATFCILSLALMSPVGLALGLTVAGGASGQTQGLAQAVLEGIAAGTFLYVTFLEILPR
ELACPEAPLAKYSCVAAGFAFMALIALWA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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