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Report for CCDS15457.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15457.1 Public Mus musculus 1 Mgst3 23 108 98 CCDS HistoryNCBI Gene:66447Re-query CCDS DB by CCDS ID:15457.1Re-query CCDS DB by GeneID:66447See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15457.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000028005.2 ENSMUSP00000028005.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000028005.2Link to Ensembl Protein Viewer:ENSMUSP00000028005.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000028005Re-query CCDS DB by Protein ID:ENSMUSP00000028005
Original member Current member NCBI NM_025569.2 NP_079845.1 Accepted alive Link to Nucleotide Sequence:NM_025569.2Link to Protein Sequence:NP_079845.1Re-query CCDS DB by Nucleotide ID:NM_025569Re-query CCDS DB by Protein ID:NP_079845Link to BLAST:NP_079845.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079845.1 153 Q9CPU4 153 100% 0 0

Chromosomal Locations for CCDS 15457.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 167372503 167372642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 167373793 167373865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 167375452 167375509 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 167377261 167377334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 167378292 167378408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (462 nt):
ATGGCTGTCCTCTCTAAGGAGTATGGATTTGTGCTTCTCACTGGTGCTGCCAGCTTTGTGATGGTGCTCC
ACCTAGCCATCAACGTGGGCAAAGCCCGCAAGAAGTACAAGGTAGAGTACCCTGTCATGTACAGCACAGA
TCCTGAGAACGGGCATATGTTCAACTGCATTCAGCGCGCCCACCAGAACACGTTGGAGGTGTACCCTCCC
TTCCTGTTTTTCCTAACGGTGGGAGGTGTTTACCACCCGCGCATAGCTTCTGGCCTGGGCCTGGCCTGGA
TTATTGGGCGAGTCCTTTACGCATATGGCTACTACACAGGAGACCCTAGCAAGCGGTATCGAGGAGCCGT
GGGCTCTCTTGCCCTCTTTGCCCTGATGGGCACCACCGTGTGCTCTGCTTTCCAGCATCTCGGCTGGATC
AGACCAGGCTTAGGCTACGGGTCCAGATCCTGCCACCACTGA

Translation (153 aa):
MAVLSKEYGFVLLTGAASFVMVLHLAINVGKARKKYKVEYPVMYSTDPENGHMFNCIQRAHQNTLEVYPP
FLFFLTVGGVYHPRIASGLGLAWIIGRVLYAYGYYTGDPSKRYRGAVGSLALFALMGTTVCSAFQHLGWI
RPGLGYGSRSCHH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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