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Report for CCDS87749.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87749.1 Public Homo sapiens X KLF8 24 110 108 CCDS HistoryNCBI Gene:11279Re-query CCDS DB by CCDS ID:87749.1Re-query CCDS DB by GeneID:11279See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 87749.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000640927.1 ENSP00000492126.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000640927.1Link to Ensembl Protein Viewer:ENSP00000492126.1Re-query CCDS DB by Nucleotide ID:ENST00000640927Re-query CCDS DB by Protein ID:ENSP00000492126
Original member Current member NCBI NM_001324099.1 NP_001311028.1 Accepted alive Link to Nucleotide Sequence:NM_001324099.1Link to Protein Sequence:NP_001311028.1Re-query CCDS DB by Nucleotide ID:NM_001324099Re-query CCDS DB by Protein ID:NP_001311028Link to BLAST:NP_001311028.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001311028.1 252 O95600-4 252 100% 0 0

Chromosomal Locations for CCDS 87749.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 56233276 56233341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 56265180 56265744 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 56269378 56269489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 56284313 56284328 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (759 nt):
ATGAGCCTCCCGGAGGACGGCATGAGTTCTGGACACTTCAGGAGTCCTCAGCTAGTGACATGGTCGGTCA
CTGCTTCTGTTCGGAACAGAGATCCCCCTGAGATAGAATACAGAAGTAATATGACTTCTCCAACACTCCT
GGATGCCAACCCCATGGAGAACCCAGCACTGTTTAATGACATCAAGATTGAGCCCCCAGAAGAACTTTTG
GCTAGTGATTTCAGCCTGCCCCAAGTGGAACCAGTTGACCTCTCCTTTCACAAGCCCAAGGCTCCTCTCC
AGCCTGCTAGCATGCTACAAGCTCCAATACGTCCCCCCAAGCCACAGTCTTCTCCCCAGACCCTTGTGGT
GTCCACGTCAACATCTGACATGAGCACTTCAGCAAACATTCCTACTGTTCTGACCCCAGGCTCTGTCCTG
ACCTCCTCTCAGAGCACTGGTAGCCAGCAGATCTTACATGTCATTCACACTATCCCCTCAGTCAGTCTGC
CAAATAAGATGGGTGGCCTGAAGACCATCCCAGTGGTAGTGCAGTCTCTGCCCATGGTGTATACTACTTT
GCCTGCAGATGGGGGCCCTGCAGCCATTACAGTCCCACTCATTGGAGGAGATGGTAAAAATGCTGGATCA
GTGAAAGTTGACCCCACCTCCATGTCTCCACTGGAAATTCCAAGTGACAGTGAGGAGAGTACAATTGAGA
GTGGATCCTCAGCCTTGCAGAGTCTGCAGGGACTACAGCAAGAGAGAGAAGCCTTATAA

Translation (252 aa):
MSLPEDGMSSGHFRSPQLVTWSVTASVRNRDPPEIEYRSNMTSPTLLDANPMENPALFNDIKIEPPEELL
ASDFSLPQVEPVDLSFHKPKAPLQPASMLQAPIRPPKPQSSPQTLVVSTSTSDMSTSANIPTVLTPGSVL
TSSQSTGSQQILHVIHTIPSVSLPNKMGGLKTIPVVVQSLPMVYTTLPADGGPAAITVPLIGGDGKNAGS
VKVDPTSMSPLEIPSDSEESTIESGSSALQSLQGLQQEREAL


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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