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Report for CCDS47646.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47646.1 Public Homo sapiens 7 DYNC1I1 24 110 108 CCDS HistoryNCBI Gene:1780Re-query CCDS DB by CCDS ID:47646.1Re-query CCDS DB by GeneID:1780See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47646.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000359388.8 ENSP00000352348.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000359388.8Link to Ensembl Protein Viewer:ENSP00000352348.4Re-query CCDS DB by Nucleotide ID:ENST00000359388Re-query CCDS DB by Protein ID:ENSP00000352348
Original member Current member NCBI NM_001135557.2 NP_001129029.1 Accepted alive Link to Nucleotide Sequence:NM_001135557.2Link to Protein Sequence:NP_001129029.1Re-query CCDS DB by Nucleotide ID:NM_001135557Re-query CCDS DB by Protein ID:NP_001129029Link to BLAST:NP_001129029.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001129029.1 608 O14576-3 608 100% 0 0

Chromosomal Locations for CCDS 47646.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 95804730 95804837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 95810392 95810506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 95813247 95813337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 95869883 95869998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 95977512 95977601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 95984815 95984977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 95987056 95987155 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 95995948 95996073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 96028175 96028321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 96032667 96032780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 96035619 96035752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 96039277 96039421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 96076057 96076197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 96080363 96080488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 96097483 96097593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1827 nt):
ATGTCTGACAAAAGTGACTTAAAAGCTGAGCTAGAGCGCAAAAAGCAGCGCTTAGCACAGATAAGAGAAG
AGAAGAAACGGAAGGAAGAGGAGAGGAAAAAGAAAGAGGCTGATATGCAGCAGAAGAAAGAACCCGTTCA
GGACGACTCTGATCTGGATCGCAAACGACGAGAGACAGAGGCTTTGCTGCAAAGCATTGGTATCTCACCG
GAGCCGCCTCTAGTCCCAACCCCTATGTCTCCCTCCTCGAAATCAGTGAGCACTCCCAGTGAAGCTGGAA
GCCAAGACTCAGGCGATCTGGGGCCATTAACAAGAAGAAGACTGCATAAACTGGGCGTGTCAAAGGTCAC
CCAAGTGGATTTCCTGCCAAGGGAAGTAGTGTCCTACTCAAAGGAGACCCAGACTCCTCTTGCCACGCAT
CAGTCTGAAGAGGATGAGGAAGATGAGGAAATGGTGGAATCTAAAGTTGGCCAGGACTCAGAACTGGAAA
ATCAGGACAAAAAACAGGAAGTGAAGGAAGCCCCTCCAAGAGAGTTGACAGAGGAAGAAAAACAGCAGAT
CCTTCATTCAGAGGAATTTCTCATCTTTTTTGACCGGACAATACGGGTAATTGAAAGAGCCCTGGCTGAA
GATTCCGACATCTTTTTTGACTACAGCGGCCGAGAGTTAGAGGAAAAAGATGGGGATGTTCAGGCTGGAG
CCAATCTTTCTTTCAATCGTCAGTTCTATGATGAACATTGGTCCAAGCATCGAGTGGTCACTTGTATGGA
CTGGTCCCTCCAGTACCCTGAGCTGATGGTGGCTTCTTACAACAACAATGAAGATGCTCCCCATGAACCA
GATGGAGTGGCCTTGGTTTGGAACATGAAGTTTAAGAAAACCACACCAGAATACGTCTTCCACTGTCAGT
CCTCTGTGATGTCGGTCTGCTTCGCCCGTTTCCATCCTAACTTGGTGGTTGGTGGGACTTACTCGGGCCA
GATTGTCCTCTGGGACAATCGCAGTCATCGAAGGACTCCAGTGCAGCGGACACCCTTATCAGCTGCTGCA
CACACGCATCCCGTGTACTGTGTAAATGTTGTTGGGACCCAGAATGCTCATAACCTCATCACTGTCTCCA
CTGATGGCAAAATGTGTTCCTGGAGCCTGGACATGCTCTCAACTCCACAGGAGAGCATGGAGCTGGTGTA
CAATAAGTCCAAGCCTGTCGCTGTTACCGGAATGGCTTTCCCAACGGGAGACGTCAATAACTTCGTGGTT
GGCAGTGAGGAAGGTACAGTCTACACGGCTTGTCGTCATGGAAGCAAAGCAGGTATTGGTGAGGTCTTTG
AAGGTCACCAAGGGCCAGTGACAGGAATTAACTGCCACATGGCAGTGGGCCCAATCGACTTTTCTCACCT
GTTTGTCACATCATCATTTGACTGGACTGTCAAACTGTGGACCACCAAGCACAACAAGCCGCTCTACTCC
TTTGAAGACAATGCAGACTATGTGTACGATGTCATGTGGTCCCCCGTGCATCCTGCGCTTTTTGCCTGCG
TGGACGGGATGGGGCGCTTGGACCTCTGGAACCTCAACAATGACACCGAGGTTCCAACAGCAAGTGTGGC
CATTGAGGGGGCATCCGCCCTAAACCGTGTTCGTTGGGCCCAAGCTGGCAAAGAAGTTGCTGTTGGGGAC
TCGGAAGGCCGTATTTGGGTCTATGACGTTGGAGAGCTTGCAGTTCCCCACAATGATGAATGGACCCGAT
TTGCCAGGACCCTTGTGGAAATTCGTGCTAACAGAGCTGATAGCGAGGAGGAAGGCACTGTTGAGTTATC
TGCCTAG

Translation (608 aa):
MSDKSDLKAELERKKQRLAQIREEKKRKEEERKKKEADMQQKKEPVQDDSDLDRKRRETEALLQSIGISP
EPPLVPTPMSPSSKSVSTPSEAGSQDSGDLGPLTRRRLHKLGVSKVTQVDFLPREVVSYSKETQTPLATH
QSEEDEEDEEMVESKVGQDSELENQDKKQEVKEAPPRELTEEEKQQILHSEEFLIFFDRTIRVIERALAE
DSDIFFDYSGRELEEKDGDVQAGANLSFNRQFYDEHWSKHRVVTCMDWSLQYPELMVASYNNNEDAPHEP
DGVALVWNMKFKKTTPEYVFHCQSSVMSVCFARFHPNLVVGGTYSGQIVLWDNRSHRRTPVQRTPLSAAA
HTHPVYCVNVVGTQNAHNLITVSTDGKMCSWSLDMLSTPQESMELVYNKSKPVAVTGMAFPTGDVNNFVV
GSEEGTVYTACRHGSKAGIGEVFEGHQGPVTGINCHMAVGPIDFSHLFVTSSFDWTVKLWTTKHNKPLYS
FEDNADYVYDVMWSPVHPALFACVDGMGRLDLWNLNNDTEVPTASVAIEGASALNRVRWAQAGKEVAVGD
SEGRIWVYDVGELAVPHNDEWTRFARTLVEIRANRADSEEEGTVELSA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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