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Report for CCDS93776.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93776.1 Public Homo sapiens 5 C5orf63 24 110 108 CCDS HistoryNCBI Gene:401207Re-query CCDS DB by CCDS ID:93776.1Re-query CCDS DB by GeneID:401207See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 93776.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000606937.6 ENSP00000475810.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000606937.6Link to Ensembl Protein Viewer:ENSP00000475810.2Re-query CCDS DB by Nucleotide ID:ENST00000606937Re-query CCDS DB by Protein ID:ENSP00000475810
Original member Current member NCBI NM_001388304.1 NP_001375233.1 Accepted alive Link to Nucleotide Sequence:NM_001388304.1Link to Protein Sequence:NP_001375233.1Re-query CCDS DB by Nucleotide ID:NM_001388304Re-query CCDS DB by Protein ID:NP_001375233Link to BLAST:NP_001375233.1

Chromosomal Locations for CCDS 93776.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 127051397 127051484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 127051892 127051947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 127052613 127052669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 127058882 127058995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (315 nt):
ATGCTCTGGTTTCAAGGAAATAGCATGCAACTTGCCAGATCCTCCTTTGGACTCTTCTTGAGAAATTGCT
CTGCCTCTAAGACAACTCTGCCTGTGTTGACCTTATTCACAAAGGACCCATGCCCCCTTTGTGATGAAGC
CAAGGAAGTACTCAAGCCTTATGAAAACAGGTTCATTTTACAGGAGGTGAACATCACACTTCCAGAAAAC
TCTGTCTGGTATGAAAGAGAAGCACTTCACAGTCACTGGGCAATGCCATTTATAGGAAGAAGGTTCTGCA
TTCCTGCTGCTGCCCCGGAGGGCTTAACTTTTTAA

Translation (104 aa):
MLWFQGNSMQLARSSFGLFLRNCSASKTTLPVLTLFTKDPCPLCDEAKEVLKPYENRFILQEVNITLPEN
SVWYEREALHSHWAMPFIGRRFCIPAAAPEGLTF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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