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Report for CCDS43190.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43190.1 Public Homo sapiens 3 ZDHHC19 24 110 108 CCDS HistoryNCBI Gene:131540Re-query CCDS DB by CCDS ID:43190.1Re-query CCDS DB by GeneID:131540See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43190.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000296326.8 ENSP00000296326.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000296326.8Link to Ensembl Protein Viewer:ENSP00000296326.3Re-query CCDS DB by Nucleotide ID:ENST00000296326Re-query CCDS DB by Protein ID:ENSP00000296326
Original member Current member NCBI NM_001039617.2 NP_001034706.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001039617.2Link to Protein Sequence:NP_001034706.1Re-query CCDS DB by Nucleotide ID:NM_001039617Re-query CCDS DB by Protein ID:NP_001034706Link to BLAST:NP_001034706.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001034706.1 309 Q8WVZ1-1 309 100% 0 0

Chromosomal Locations for CCDS 43190.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 196198295 196198451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 196198789 196198874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 196207398 196207503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 196208388 196208560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 196209376 196209515 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 196210616 196210737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 196211170 196211315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (930 nt):
ATGACACTCTTAACGGATGCCACGCCGCTGGTGAAGGAGCCCCATCCCCTGCCTCTGGTCCCACGTCCCT
GGTTCCTCCCTAGCCTCTTTGCTGCCTTCAATGTGGTGCTGCTGGTCTTTTTCAGTGGCCTCTTCTTCGC
ATTCCCTTGCAGGTGGCTGGCTCAGAACGGGGAGTGGGCCTTTCCTGTTATCACAGGCTCCCTCTTTGTC
CTTACCTTCTTCAGTCTTGTTTCACTCAACTTCTCAGACCCTGGCATCTTACATCAAGGCTCCGCTGAGC
AGGGCCCCTTGACGGTGCACGTGGTGTGGGTGAACCACGGGGCCTTCCGCCTGCAATGGTGTCCAAAGTG
CTGCTTCCACCGCCCGCCCCGGACTTACCACTGCCCCTGGTGCAACATCTGTGTGGAGGACTTTGACCAC
CACTGCAAGTGGGTCAATAACTGCATCGGTCACCGCAACTTCCGCTTCTTCATGCTGCTTGTCCTGTCCC
TGTGCCTCTACTCGGGCGCCATGCTGGTCACCTGTCTCATCTTCCTGGTGCGCACAACCCACCTGCCCTT
CTCCACCGACAAGGCCATCGCCATCGTGGTGGCCGTGTCCGCCGCGGGCCTCCTGGTGCCGCTGTCCCTC
CTGCTGCTGATCCAGGCACTGTCCGTGAGCTCGGCCGACCGCACCTACAAGGGCAAGTGCAGACACCTTC
AGGGATACAACCCCTTCGACCAGGGCTGTGCCAGCAACTGGTATTTAACAATTTGTGCACCACTGGGACC
CAAGTACATGGCTGAAGCTGTCCAGCTGCAGAGAGTGGTGGGGCCTGACTGGACATCCATGCCGAATCTG
CACCCTCCAATGTCCCCCTCTGCTCTCAACCCCCCAGCCCCAACCTCTGGGTCCCTACAAAGCAGGGAAG
GGACCCCCGGGGCGTGGTGA

Translation (309 aa):
MTLLTDATPLVKEPHPLPLVPRPWFLPSLFAAFNVVLLVFFSGLFFAFPCRWLAQNGEWAFPVITGSLFV
LTFFSLVSLNFSDPGILHQGSAEQGPLTVHVVWVNHGAFRLQWCPKCCFHRPPRTYHCPWCNICVEDFDH
HCKWVNNCIGHRNFRFFMLLVLSLCLYSGAMLVTCLIFLVRTTHLPFSTDKAIAIVVAVSAAGLLVPLSL
LLLIQALSVSSADRTYKGKCRHLQGYNPFDQGCASNWYLTICAPLGPKYMAEAVQLQRVVGPDWTSMPNL
HPPMSPSALNPPAPTSGSLQSREGTPGAW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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