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Report for CCDS46967.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46967.1 Public Homo sapiens 3 ALG3 24 110 108 CCDS HistoryNCBI Gene:10195Re-query CCDS DB by CCDS ID:46967.1Re-query CCDS DB by GeneID:10195See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46967.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000445626.6 ENSP00000402744.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000445626.6Link to Ensembl Protein Viewer:ENSP00000402744.2Re-query CCDS DB by Nucleotide ID:ENST00000445626Re-query CCDS DB by Protein ID:ENSP00000402744
Original member Current member NCBI NM_001006941.2 NP_001006942.1 Accepted alive Link to Nucleotide Sequence:NM_001006941.2Link to Protein Sequence:NP_001006942.1Re-query CCDS DB by Nucleotide ID:NM_001006941Re-query CCDS DB by Protein ID:NP_001006942Link to BLAST:NP_001006942.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001006942.1 390 Q92685-2 390 100% 0 0

Chromosomal Locations for CCDS 46967.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 184242514 184242676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 184242813 184242957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 184243554 184243630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 184243791 184243996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 184244601 184244721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 184245198 184245358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 184245468 184245615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 184245713 184245812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 184249226 184249277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1173 nt):
ATGTTCCCAGCGCAGGCGAAGGAGAATGCTGGCTTCAGCGGTTGTGGGGGAGACACAGAGATTGACTGGA
AGGCCTACATGGCCGAGGTAGAAGGCGTCATCAATGGTACCTATGACTATACCCAACTGCAGGGTGACAC
CGGACCACTTGTGTACCCAGCTGGTTTCGTGTACATCTTTATGGGGTTGTACTATGCCACCAGCCGAGGC
ACTGACATCCGCATGGCCCAGAACATCTTTGCTGTGCTCTACCTGGCTACCTTGCTGCTTGTCTTCTTGA
TCTATCACCAGACCTGCAAGGTACCTCCCTTCGTCTTTTTCTTCATGTGCTGCGCCTCTTACCGTGTCCA
CTCCATCTTTGTGCTGCGGCTCTTCAATGACCCAGTGGCCATGGTGCTGCTCTTCCTCAGTATCAACCTC
CTGCTGGCCCAGCGCTGGGGCTGGGGTTGCTGCTTTTTCAGCCTGGCAGTCTCTGTGAAGATGAATGTGC
TGCTCTTCGCCCCTGGGTTACTGTTTCTTCTCCTCACACAGTTTGGCTTCCGTGGGGCCCTCCCCAAGCT
GGGAATCTGTGCTGGCCTTCAGGTGGTGCTGGGGCTGCCCTTCCTGCTGGAGAACCCCAGCGGCTACCTG
TCCCGCTCCTTTGACCTTGGCCGCCAGTTTCTGTTCCACTGGACAGTGAACTGGCGCTTCCTCCCAGAGG
CGCTCTTCCTGCATCGAGCCTTCCACCTGGCCCTGTTGACTGCCCACCTCACCCTGCTCCTGCTGTTTGC
CCTCTGCAGGTGGCACAGGACAGGGGAAAGTATCTTGTCGCTGCTGAGGGATCCCTCCAAAAGGAAGGTT
CCACCCCAGCCCCTTACACCCAACCAGATCGTTTCTACCCTCTTCACCTCCAACTTCATTGGCATCTGCT
TCAGCCGCTCCCTCCACTACCAGTTCTACGTCTGGTATTTCCACACACTGCCCTACCTCCTGTGGGCCAT
GCCTGCACGCTGGCTCACACACCTGCTCAGGTTGTTGGTGCTGGGGCTCATCGAGCTCTCCTGGAACACA
TACCCTTCCACATCCTGCAGCTCTGCTGCCCTGCACATATGCCATGCCGTCATCCTGCTGCAGCTCTGGC
TGGGCCCGCAGCCTTTCCCCAAGAGCACCCAACACAGCAAGAAAGCCCACTGA

Translation (390 aa):
MFPAQAKENAGFSGCGGDTEIDWKAYMAEVEGVINGTYDYTQLQGDTGPLVYPAGFVYIFMGLYYATSRG
TDIRMAQNIFAVLYLATLLLVFLIYHQTCKVPPFVFFFMCCASYRVHSIFVLRLFNDPVAMVLLFLSINL
LLAQRWGWGCCFFSLAVSVKMNVLLFAPGLLFLLLTQFGFRGALPKLGICAGLQVVLGLPFLLENPSGYL
SRSFDLGRQFLFHWTVNWRFLPEALFLHRAFHLALLTAHLTLLLLFALCRWHRTGESILSLLRDPSKRKV
PPQPLTPNQIVSTLFTSNFIGICFSRSLHYQFYVWYFHTLPYLLWAMPARWLTHLLRLLVLGLIELSWNT
YPSTSCSSAALHICHAVILLQLWLGPQPFPKSTQHSKKAH


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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