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Report for CCDS54659.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
54659.1 Public Homo sapiens 3 C3orf33 24 110 108 CCDS HistoryNCBI Gene:285315Re-query CCDS DB by CCDS ID:54659.1Re-query CCDS DB by GeneID:285315See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 54659.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000534941.2 ENSP00000445446.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000534941.2Link to Ensembl Protein Viewer:ENSP00000445446.1Re-query CCDS DB by Nucleotide ID:ENST00000534941Re-query CCDS DB by Protein ID:ENSP00000445446
Original member Current member NCBI NM_173657.3 NP_775928.1 Accepted alive Link to Nucleotide Sequence:NM_173657.3Link to Protein Sequence:NP_775928.1Re-query CCDS DB by Nucleotide ID:NM_173657Re-query CCDS DB by Protein ID:NP_775928Link to BLAST:NP_775928.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_775928.1 251 Q6P1S2-2 251 100% 0 0

Chromosomal Locations for CCDS 54659.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 155763517 155763918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 155767509 155767669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 155775701 155775848 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 155802532 155802576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (756 nt):
ATGGCCATAGCTGGAATAATGTTACTTTTGAGAAGCATTCGACTGACATCAAAATTTACAAGCTCTTCGG
ATATTCCAGTAGAATTTATAAGAAGAAATGTTAAACTACGTGGACGATTACGCCGAATAACTGAGAATGG
TTTAGAAATTGAACATATACCTATTACTTTACCTATTATAGCTTCATTGAGAAAAGAGCCACGTGGTGCT
TTGCTGGTTAAGTTGGCTGGAGTAGAACTCGCTGAAACTGGGAAGGCATGGTTACAAAAAGAGCTAAAAC
CTTCCCAATTACTATGGTTCCAACTTCTTGGAAAGGAGAATTCAGCACTCTTTTGCTATCTTCTGGTGAG
TAAGGGTGGATATTTCAGCGTGAATCTGAATGAAGAAATTTTGAGAAGAGGCCTTGGCAAAACTGTTCTT
GTTAAAGGGCTTAAATATGATTCTAAAATCTACTGGACAGTTCACAGAAACTTACTTAAAGCTGAATTAA
CAGCCTTAAAAAAAGGAGAAGGAATATGGAAGGAAGACTCTGAAAAAGAAAGTTACTTAGAAAAATTCAA
AGATTCCTGGAGAGAAATATGGAAAAAGGACAGTTTTTTAAAAACAACAGGATCAGATTTCAGCTTGAAA
AAAGAAAGTTATTATGAAAAACTTAAAAGGACTTATGAAATATGGAAAGACAACATGAACAACTGCTCCT
TAATACTGAAGTTCAGAGAACTTATAAGTCGCATAAACTTTCGTAGAAAAGGGTGA

Translation (251 aa):
MAIAGIMLLLRSIRLTSKFTSSSDIPVEFIRRNVKLRGRLRRITENGLEIEHIPITLPIIASLRKEPRGA
LLVKLAGVELAETGKAWLQKELKPSQLLWFQLLGKENSALFCYLLVSKGGYFSVNLNEEILRRGLGKTVL
VKGLKYDSKIYWTVHRNLLKAELTALKKGEGIWKEDSEKESYLEKFKDSWREIWKKDSFLKTTGSDFSLK
KESYYEKLKRTYEIWKDNMNNCSLILKFRELISRINFRRKG


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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