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Report for CCDS43063.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43063.1 Public Homo sapiens 3 ARPP21 24 110 108 CCDS HistoryNCBI Gene:10777Re-query CCDS DB by CCDS ID:43063.1Re-query CCDS DB by GeneID:10777See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43063.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000396481.6 ENSP00000379741.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000396481.6Link to Ensembl Protein Viewer:ENSP00000379741.2Re-query CCDS DB by Nucleotide ID:ENST00000396481Re-query CCDS DB by Protein ID:ENSP00000379741
Original member Current member EBI ENST00000396482.6 ENSP00000379742.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000396482.6Link to Ensembl Protein Viewer:ENSP00000379742.2Re-query CCDS DB by Nucleotide ID:ENST00000396482Re-query CCDS DB by Protein ID:ENSP00000379742
Original member Current member EBI ENST00000432682.5 ENSP00000389754.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000432682.5Link to Ensembl Protein Viewer:ENSP00000389754.1Re-query CCDS DB by Nucleotide ID:ENST00000432682Re-query CCDS DB by Protein ID:ENSP00000389754
Original member Current member EBI ENST00000412048.5 ENSP00000390151.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000412048.5Link to Ensembl Protein Viewer:ENSP00000390151.1Re-query CCDS DB by Nucleotide ID:ENST00000412048Re-query CCDS DB by Protein ID:ENSP00000390151
Original member Current member EBI ENST00000436702.5 ENSP00000397720.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000436702.5Link to Ensembl Protein Viewer:ENSP00000397720.1Re-query CCDS DB by Nucleotide ID:ENST00000436702Re-query CCDS DB by Protein ID:ENSP00000397720
Original member Current member EBI ENST00000427542.5 ENSP00000401602.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000427542.5Link to Ensembl Protein Viewer:ENSP00000401602.1Re-query CCDS DB by Nucleotide ID:ENST00000427542Re-query CCDS DB by Protein ID:ENSP00000401602
Original member Current member EBI ENST00000441454.5 ENSP00000406964.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000441454.5Link to Ensembl Protein Viewer:ENSP00000406964.1Re-query CCDS DB by Nucleotide ID:ENST00000441454Re-query CCDS DB by Protein ID:ENSP00000406964
Original member Current member EBI ENST00000438071.1 ENSP00000410171.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000438071.1Link to Ensembl Protein Viewer:ENSP00000410171.1Re-query CCDS DB by Nucleotide ID:ENST00000438071Re-query CCDS DB by Protein ID:ENSP00000410171
Original member Current member EBI ENST00000428373.5 ENSP00000412411.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000428373.5Link to Ensembl Protein Viewer:ENSP00000412411.1Re-query CCDS DB by Nucleotide ID:ENST00000428373Re-query CCDS DB by Protein ID:ENSP00000412411
Original member Current member EBI ENST00000474696.5 ENSP00000417838.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000474696.5Link to Ensembl Protein Viewer:ENSP00000417838.1Re-query CCDS DB by Nucleotide ID:ENST00000474696Re-query CCDS DB by Protein ID:ENSP00000417838
Original member Current member NCBI NM_001025068.1 NP_001020239.1 Accepted alive Link to Nucleotide Sequence:NM_001025068.1Link to Protein Sequence:NP_001020239.1Re-query CCDS DB by Nucleotide ID:NM_001025068Re-query CCDS DB by Protein ID:NP_001020239Link to BLAST:NP_001020239.1
Original member Current member NCBI NM_001025069.1 NP_001020240.1 Accepted alive Link to Nucleotide Sequence:NM_001025069.1Link to Protein Sequence:NP_001020240.1Re-query CCDS DB by Nucleotide ID:NM_001025069Re-query CCDS DB by Protein ID:NP_001020240Link to BLAST:NP_001020240.1
Original member Current member NCBI NM_001267616.2 NP_001254545.1 Accepted alive Link to Nucleotide Sequence:NM_001267616.2Link to Protein Sequence:NP_001254545.1Re-query CCDS DB by Nucleotide ID:NM_001267616Re-query CCDS DB by Protein ID:NP_001254545Link to BLAST:NP_001254545.1
Original member Current member NCBI NM_001267618.2 NP_001254547.1 Accepted alive Link to Nucleotide Sequence:NM_001267618.2Link to Protein Sequence:NP_001254547.1Re-query CCDS DB by Nucleotide ID:NM_001267618Re-query CCDS DB by Protein ID:NP_001254547Link to BLAST:NP_001254547.1
Original member Current member NCBI NM_198399.2 NP_938409.1 Accepted alive Link to Nucleotide Sequence:NM_198399.2Link to Protein Sequence:NP_938409.1Re-query CCDS DB by Nucleotide ID:NM_198399Re-query CCDS DB by Protein ID:NP_938409Link to BLAST:NP_938409.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001020239.1 89 Q9UBL0-2 89 100% 0 0
NP_001020240.1 89 Q9UBL0-2 89 100% 0 0
NP_001254545.1 89 Q9UBL0-2 89 100% 0 0
NP_001254547.1 89 Q9UBL0-2 89 100% 0 0
NP_938409.1 89 Q9UBL0-2 89 100% 0 0

Chromosomal Locations for CCDS 43063.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 35681752 35681880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35682848 35682889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35683726 35683815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35684021 35684029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (270 nt):
ATGTCTGAGCAAGGAGACCTGAATCAGGCAATAGCAGAGGAAGGAGGGACTGAGCAGGAGACGGCCACTC
CAGAGAACGGCATTGTTAAATCAGAAAGTCTGGATGAAGAGGAGAAACTGGAACTGCAGAGGCGGCTGGA
GGCTCAGAATCAAGAAAGAAGAAAATCCAAGTCAGGAGCAGGAAAAGGTAAACTGACTCGCAGCCTTGCT
GTCTGTGAGGAATCTTCTGCCAGACCAGGAGGTGAAAGTCTTCAGGATCAGACTCTCTGA

Translation (89 aa):
MSEQGDLNQAIAEEGGTEQETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGAGKGKLTRSLA
VCEESSARPGGESLQDQTL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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