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Report for CCDS33722.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33722.1 Public Homo sapiens 3 CMC1 24 110 108 CCDS HistoryNCBI Gene:152100Re-query CCDS DB by CCDS ID:33722.1Re-query CCDS DB by GeneID:152100See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33722.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000466830.6 ENSP00000418348.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000466830.6Link to Ensembl Protein Viewer:ENSP00000418348.1Re-query CCDS DB by Nucleotide ID:ENST00000466830Re-query CCDS DB by Protein ID:ENSP00000418348
Original member Current member NCBI NM_182523.2 NP_872329.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_182523.2Link to Protein Sequence:NP_872329.1Re-query CCDS DB by Nucleotide ID:NM_182523Re-query CCDS DB by Protein ID:NP_872329Link to BLAST:NP_872329.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_872329.1 106 Q7Z7K0 106 100% 0 0

Chromosomal Locations for CCDS 33722.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 28241794 28241812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 28263291 28263380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 28316333 28316423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 28319509 28319629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (321 nt):
ATGGCGCTCGACCCCGCAGACCAGCATCTCAGACATGTCGAAAAAGATGTTTTGATCCCTAAAATAATGA
GAGAAAAGGCCAAAGAGAGGTGTTCTGAACAAGTTCAAGATTTTACCAAATGTTGCAAGAACTCTGGAGT
TCTTATGGTAGTAAAATGCCGGAAAGAAAATTCTGCATTGAAAGAATGTCTAACTGCTTACTATAATGAT
CCAGCCTTTTATGAAGAATGCAAAATGGAATACCTGAAGGAAAGGGAAGAATTCAGAAAAACTGGAATTC
CTACAAAGAAAAGGCTACAGAAGCTTCCAACAAGCATGTAG

Translation (106 aa):
MALDPADQHLRHVEKDVLIPKIMREKAKERCSEQVQDFTKCCKNSGVLMVVKCRKENSALKECLTAYYND
PAFYEECKMEYLKEREEFRKTGIPTKKRLQKLPTSM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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