NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS13793.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13793.1 Public Homo sapiens 22 PPIL2 24 110 108 CCDS HistoryNCBI Gene:23759Re-query CCDS DB by CCDS ID:13793.1Re-query CCDS DB by GeneID:23759See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13793.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000335025.12 ENSP00000334553.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000335025.12Link to Ensembl Protein Viewer:ENSP00000334553.7Re-query CCDS DB by Nucleotide ID:ENST00000335025Re-query CCDS DB by Protein ID:ENSP00000334553
Original member Current member EBI ENST00000398831.8 ENSP00000381812.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000398831.8Link to Ensembl Protein Viewer:ENSP00000381812.3Re-query CCDS DB by Nucleotide ID:ENST00000398831Re-query CCDS DB by Protein ID:ENSP00000381812
Original member Current member EBI ENST00000406385.1 ENSP00000384299.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000406385.1Link to Ensembl Protein Viewer:ENSP00000384299.1Re-query CCDS DB by Nucleotide ID:ENST00000406385Re-query CCDS DB by Protein ID:ENSP00000384299
Original member Current member EBI ENST00000679534.1 ENSP00000504893.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000679534.1Link to Ensembl Protein Viewer:ENSP00000504893.1Re-query CCDS DB by Nucleotide ID:ENST00000679534Re-query CCDS DB by Protein ID:ENSP00000504893
Original member Current member EBI ENST00000680061.1 ENSP00000505910.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000680061.1Link to Ensembl Protein Viewer:ENSP00000505910.1Re-query CCDS DB by Nucleotide ID:ENST00000680061Re-query CCDS DB by Protein ID:ENSP00000505910
Original member Current member EBI ENST00000679795.1 ENSP00000506144.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000679795.1Link to Ensembl Protein Viewer:ENSP00000506144.1Re-query CCDS DB by Nucleotide ID:ENST00000679795Re-query CCDS DB by Protein ID:ENSP00000506144
Original member Current member EBI ENST00000681956.1 ENSP00000506158.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000681956.1Link to Ensembl Protein Viewer:ENSP00000506158.1Re-query CCDS DB by Nucleotide ID:ENST00000681956Re-query CCDS DB by Protein ID:ENSP00000506158
Original member Current member EBI ENST00000679540.1 ENSP00000506328.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000679540.1Link to Ensembl Protein Viewer:ENSP00000506328.1Re-query CCDS DB by Nucleotide ID:ENST00000679540Re-query CCDS DB by Protein ID:ENSP00000506328
Original member Current member EBI ENST00000680393.1 ENSP00000506542.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000680393.1Link to Ensembl Protein Viewer:ENSP00000506542.1Re-query CCDS DB by Nucleotide ID:ENST00000680393Re-query CCDS DB by Protein ID:ENSP00000506542
Original member Current member NCBI NM_001317996.2 NP_001304925.1 Accepted alive Link to Nucleotide Sequence:NM_001317996.2Link to Protein Sequence:NP_001304925.1Re-query CCDS DB by Nucleotide ID:NM_001317996Re-query CCDS DB by Protein ID:NP_001304925Link to BLAST:NP_001304925.1
Original member Current member NCBI NM_014337.4 NP_055152.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014337.4Link to Protein Sequence:NP_055152.1Re-query CCDS DB by Nucleotide ID:NM_014337Re-query CCDS DB by Protein ID:NP_055152Link to BLAST:NP_055152.1
Original member Current member NCBI NM_148175.3 NP_680480.1 Accepted alive Link to Nucleotide Sequence:NM_148175.3Link to Protein Sequence:NP_680480.1Re-query CCDS DB by Nucleotide ID:NM_148175Re-query CCDS DB by Protein ID:NP_680480Link to BLAST:NP_680480.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001304925.1 520 Q13356-1 520 100% 0 0
NP_055152.1 520 Q13356-1 520 100% 0 0
NP_680480.1 520 Q13356-1 520 100% 0 0

Chromosomal Locations for CCDS 13793.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 21666100 21666131 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 21669913 21669962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 21670566 21670611 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 21670997 21671059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 21672330 21672381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 21675064 21675115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 21681299 21681390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 21682437 21682526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 21683182 21683257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 21684753 21684913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 21686483 21686558 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 21686892 21686998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 21687643 21687732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 21688073 21688106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 21688732 21688849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 21693816 21693872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 21694593 21694665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 21694755 21694817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 21694937 21695070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 21695394 21695490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1563 nt):
ATGGGGAAGCGACAGCACCAAAAGGACAAAATGTACATTACCTGTGCTGAATACACTCACTTTTATGGTG
GCAAGAAGCCAGATCTCCCACAAACAAATTTTCGTCGTTTACCTTTTGACCACTGCAGTCTCTCTCTGCA
GCCCTTTGTCTACCCAGTCTGCACTCCCGATGGCATCGTCTTTGACTTACTGAACATTGTTCCATGGCTT
AAGAAGTACGGGACCAACCCCAGCAATGGAGAGAAGCTGGACGGGAGGTCCCTGATCAAGCTGAACTTTT
CCAAGAACAGTGAGGGGAAGTACCACTGCCCAGTGCTGTTTACCGTGTTCACCAACAACACCCACATCGT
GGCTGTGAGGACGACCGGCAACGTCTACGCCTATGAGGCAGTGGAACAGCTAAATATCAAGGCCAAGAAC
TTCCGGGACCTGCTGACCGACGAGCCCTTCTCCCGGCAGGACATCATCACCCTCCAGGACCCCACCAATT
TGGACAAGTTCAATGTCTCTAACTTCTATCATGTGAAGAATAACATGAAAATAATAGACCCAGATGAAGA
GAAGGCCAAACAGGACCCGTCTTATTATCTGAAAAATACAAATGCCGAGACCCGAGAGACCCTGCAGGAG
CTCTACAAGGAGTTCAAAGGGGACGAGATTCTGGCAGCCACCATGAAGGCCCCGGAGAAGAAGAAAGTGG
ACAAGCTGAACGCTGCCCACTATTCCACAGGGAAGGTCAGCGCTTCCTTCACCTCCACCGCGATGGTCCC
GGAGACCACACATGAAGCAGCTGCCATCGACGAGGATGTGCTGCGCTACCAGTTTGTGAAGAAGAAGGGC
TACGTGCGGCTGCACACCAACAAGGGCGACCTCAACCTGGAGCTGCACTGCGACCTGACACCAAAAACCT
GCGAAAACTTCATCAGGCTTTGCAAGAAGCATTATTACGATGGCACCATCTTCCACAGATCCATCCGGAA
CTTTGTGATCCAAGGGGGCGACCCCACAGGCACAGGCACGGGTGGGGAGTCATACTGGGGGAAGCCCTTC
AAAGACGAGTTCCGGCCCAACCTCTCGCACACGGGCCGCGGCATCCTCAGCATGGCCAACTCCGGGCCCA
ACAGCAACAGGTCTCAATTCTTCATCACGTTTCGCTCCTGTGCCTACCTGGACAAGAAGCATACCATCTT
TGGACGGGTTGTTGGGGGCTTTGACGTACTGACAGCCATGGAGAATGTGGAGAGTGACCCCAAAACTGAC
CGCCCTAAGGAGGAGATCCGCATTGATGCCACTACAGTGTTCGTGGACCCCTATGAGGAGGCCGATGCCC
AGATTGCGCAGGAGCGGAAGACACAGCTCAAGGTAGCCCCGGAGACCAAAGTGAAGAGCAGCCAGCCCCA
GGCAGGGAGCCAGGGCCCCCAGACCTTCCGCCAGGGCGTGGGCAAGTACATCAACCCAGCAGCCACGAAG
CGAGCAGCAGAGGAAGAGCCCTCAACCAGTGCCACTGTCCCCATGTCCAAGAAGAAGCCCAGTCGGGGTT
TTGGGGACTTCAGCTCCTGGTAG

Translation (520 aa):
MGKRQHQKDKMYITCAEYTHFYGGKKPDLPQTNFRRLPFDHCSLSLQPFVYPVCTPDGIVFDLLNIVPWL
KKYGTNPSNGEKLDGRSLIKLNFSKNSEGKYHCPVLFTVFTNNTHIVAVRTTGNVYAYEAVEQLNIKAKN
FRDLLTDEPFSRQDIITLQDPTNLDKFNVSNFYHVKNNMKIIDPDEEKAKQDPSYYLKNTNAETRETLQE
LYKEFKGDEILAATMKAPEKKKVDKLNAAHYSTGKVSASFTSTAMVPETTHEAAAIDEDVLRYQFVKKKG
YVRLHTNKGDLNLELHCDLTPKTCENFIRLCKKHYYDGTIFHRSIRNFVIQGGDPTGTGTGGESYWGKPF
KDEFRPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAMENVESDPKTD
RPKEEIRIDATTVFVDPYEEADAQIAQERKTQLKVAPETKVKSSQPQAGSQGPQTFRQGVGKYINPAATK
RAAEEEPSTSATVPMSKKKPSRGFGDFSSW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH