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Report for CCDS2259.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2259.1 Public Homo sapiens 2 GPR155 24 110 108 CCDS HistoryNCBI Gene:151556Re-query CCDS DB by CCDS ID:2259.1Re-query CCDS DB by GeneID:151556See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2259.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000295500.8 ENSP00000295500.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000295500.8Link to Ensembl Protein Viewer:ENSP00000295500.4Re-query CCDS DB by Nucleotide ID:ENST00000295500Re-query CCDS DB by Protein ID:ENSP00000295500
Original member Current member EBI ENST00000392551.6 ENSP00000376334.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000392551.6Link to Ensembl Protein Viewer:ENSP00000376334.2Re-query CCDS DB by Nucleotide ID:ENST00000392551Re-query CCDS DB by Protein ID:ENSP00000376334
Original member Current member EBI ENST00000392552.7 ENSP00000376335.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000392552.7Link to Ensembl Protein Viewer:ENSP00000376335.2Re-query CCDS DB by Nucleotide ID:ENST00000392552Re-query CCDS DB by Protein ID:ENSP00000376335
Original member Current member NCBI NM_001033045.4 NP_001028217.1 Accepted alive Link to Nucleotide Sequence:NM_001033045.4Link to Protein Sequence:NP_001028217.1Re-query CCDS DB by Nucleotide ID:NM_001033045Re-query CCDS DB by Protein ID:NP_001028217Link to BLAST:NP_001028217.1
Original member Current member NCBI NM_001267050.2 NP_001253979.1 Accepted alive Link to Nucleotide Sequence:NM_001267050.2Link to Protein Sequence:NP_001253979.1Re-query CCDS DB by Nucleotide ID:NM_001267050Re-query CCDS DB by Protein ID:NP_001253979Link to BLAST:NP_001253979.1
Original member Current member NCBI NM_152529.7 NP_689742.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152529.7Link to Protein Sequence:NP_689742.4Re-query CCDS DB by Nucleotide ID:NM_152529Re-query CCDS DB by Protein ID:NP_689742Link to BLAST:NP_689742.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001028217.1 870 Q7Z3F1 870 100% 0 0
NP_001253979.1 870 Q7Z3F1 870 100% 0 0
NP_689742.4 870 Q7Z3F1 870 100% 0 0

Chromosomal Locations for CCDS 2259.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 174436116 174436416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 174439898 174440035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 174442119 174442183 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 174445081 174445176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 174446611 174446747 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 174453737 174453841 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 174459878 174460088 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 174461402 174461492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 174461588 174461672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 174465785 174465902 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 174466544 174466627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 174468912 174469067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 174470390 174470555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 174472965 174473364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 174481497 174481956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2613 nt):
ATGAATTCTAATTTACCTGCAGAGAACTTAACCATTGCAGTCAATATGACCAAGACTTTGCCTACAGCAG
TAACGCATGGATTTAATTCCACTAATGACCCACCTTCAATGTCAATTACAAGGCTTTTTCCAGCCTTACT
GGAATGCTTTGGCATTGTCCTTTGTGGCTACATAGCAGGAAGGGCCAATGTCATAACATCAACCCAGGCC
AAAGGACTAGGAAATTTTGTCTCCAGATTTGCACTTCCAGCTTTATTATTCAAAAACATGGTTGTACTTA
ATTTTTCCAATGTGGACTGGTCCTTCCTATATAGTATCTTAATTGCCAAAGCTTCTGTATTTTTCATTGT
ATGTGTATTAACCTTATTGGTTGCCAGTCCTGATAGTCGATTTAGCAAAGCTGGACTATTCCCTATTTTT
GCTACACAAAGTAATGACTTTGCATTGGGATACCCTATAGTTGAAGCTTTATATCAAACTACATACCCAG
AATATCTCCAGTACATTTATTTGGTGGCACCAATATCTCTTATGATGTTAAACCCTATAGGGTTTATTTT
CTGTGAAATCCAAAAGTGGAAAGACACTCAAAATGCTTCTCAAAATAAAATAAAAATTGTGGGACTCGGA
CTCCTGCGTGTATTACAGAACCCAATAGTATTTATGGTCTTCATTGGCATCGCCTTCAATTTTATTCTTG
ATCGAAAGGTACCTGTATATGTCGAAAATTTTCTTGATGGACTTGGAAATTCTTTTTCTGGATCAGCCCT
ATTTTATCTTGGTCTCACGATGGTGGGAAAAATAAAGAGACTGAAGAAGTCGGCATTTGTAGTACTAATT
CTTCTCATCACAGCTAAACTTCTGGTGCTGCCACTTCTGTGCAGAGAAATGGTGGAACTCTTGGACAAGG
GCGACAGTGTGGTGAACCATACAAGTTTATCAAATTATGCATTTCTGTATGGTGTATTTCCTGTAGCACC
AGGAGTGGCTATCTTTGCAACACAATTCAACATGGAAGTAGAAATTATAACCTCAGGGATGGTGATAAGC
ACATTTGTGTCTGCTCCCATCATGTACGTTTCTGCCTGGTTACTGACCTTTCCCACTATGGACCCTAAGC
CATTGGCATATGCCATCCAGAATGTTAGTTTTGATATAAGTATTGTCAGCCTGATCTCCTTGATCTGGTC
TCTGGCTATTCTTCTTTTGAGTAAGAAATATAAACAGCTTCCTCATATGCTTACAACTAATTTACTCATT
GCTCAGTCTATTGTCTGTGCTGGAATGATGATATGGAATTTTGTTAAAGAAAAAAATTTTGTTGGACAAA
TTTTGGTGTTTGTTCTATTGTACAGCTCCCTCTATAGCACCTACCTGTGGACAGGCCTTCTAGCAATTTC
TTTGTTTCTTTTGAAAAAGCGAGAGAGGGTACAAATTCCTGTTGGAATAATCATAATATCTGGCTGGGGA
ATTCCTGCTCTCCTTGTTGGTGTTCTTTTGATAACTGGAAAACACAATGGAGATAGCATTGACTCAGCCT
TCTTTTATGGAAAAGAACAGATGATCACCACAGCAGTCACCCTGTTCTGCAGCATCCTGATAGCTGGCAT
ATCCCTCATGTGCATGAACCAGACTGCCCAAGCAGGAAGCTATGAAGGTTTCGATCAGTCTCAGAGCCAC
AAAGTGGTGGAGCCTGGAAATACTGCTTTTGAGGAGAGTCCAGCACCAGTAAATGAACCAGAACTTTTTA
CAAGCTCTATTCCAGAAACAAGTTGCTGCTCCTGCTCCATGGGAAATGGTGAATTACACTGCCCATCAAT
AGAGCCAATAGCAAACACAAGCACCAGTGAGCCTGTGATTCCTTCGTTTGAGAAAAACAATCATTGTGTG
AGTCGCTGTAACTCCCAGAGCTGCATATTAGCCCAGGAAGAAGAACAGTATCTACAGAGTGGAGACCAGC
AACTGACCCGACATGTGTTGCTGTGTTTACTTCTCATCATTGGCCTGTTCGCTAATCTTTCCAGTTGTTT
ATGGTGGCTATTCAACCAAGAGCCTGGAAGACTTTATGTTGAGTTACAGTTTTTCTGTGCCGTGTTTAAC
TTTGGTCAGGGATTTATTTCCTTTGGAATCTTTGGATTAGATAAACATTTAATCATCCTGCCTTTCAAAA
GAAGACTTGAATTCCTATGGAACAATAAAGACACAGCAGAAAACAGGGATTCTCCTGTTTCAGAGGAAAT
AAAAATGACCTGTCAACAATTTATCCATTATCACCGTGACCTCTGTATCCGAAACATTGTCAAAGAAAGA
AGGTGTGGTGCAAAGACTTCTGCTGGAACTTTCTGTGGCTGTGACCTGGTGAGCTGGCTAATTGAAGTCG
GCCTTGCCTCCGACCGTGGTGAAGCTGTGATATACGGAGACAGGCTGGTACAAGGGGGAGTCATCCAACA
TATTACCAACGAGTATGAATTCCGGGATGAGTACTTGTTTTACAGATTTCTTCAAAAGAGTCCTGAACAG
AGTCCTCCTGCTATTAATGCAAACACTCTCCAACAGGAAAGATATAAAGAAATTGAGCATTCATCCCCAC
CCTCACATTCCCCTAAGACCTAA

Translation (870 aa):
MNSNLPAENLTIAVNMTKTLPTAVTHGFNSTNDPPSMSITRLFPALLECFGIVLCGYIAGRANVITSTQA
KGLGNFVSRFALPALLFKNMVVLNFSNVDWSFLYSILIAKASVFFIVCVLTLLVASPDSRFSKAGLFPIF
ATQSNDFALGYPIVEALYQTTYPEYLQYIYLVAPISLMMLNPIGFIFCEIQKWKDTQNASQNKIKIVGLG
LLRVLQNPIVFMVFIGIAFNFILDRKVPVYVENFLDGLGNSFSGSALFYLGLTMVGKIKRLKKSAFVVLI
LLITAKLLVLPLLCREMVELLDKGDSVVNHTSLSNYAFLYGVFPVAPGVAIFATQFNMEVEIITSGMVIS
TFVSAPIMYVSAWLLTFPTMDPKPLAYAIQNVSFDISIVSLISLIWSLAILLLSKKYKQLPHMLTTNLLI
AQSIVCAGMMIWNFVKEKNFVGQILVFVLLYSSLYSTYLWTGLLAISLFLLKKRERVQIPVGIIIISGWG
IPALLVGVLLITGKHNGDSIDSAFFYGKEQMITTAVTLFCSILIAGISLMCMNQTAQAGSYEGFDQSQSH
KVVEPGNTAFEESPAPVNEPELFTSSIPETSCCSCSMGNGELHCPSIEPIANTSTSEPVIPSFEKNNHCV
SRCNSQSCILAQEEEQYLQSGDQQLTRHVLLCLLLIIGLFANLSSCLWWLFNQEPGRLYVELQFFCAVFN
FGQGFISFGIFGLDKHLIILPFKRRLEFLWNNKDTAENRDSPVSEEIKMTCQQFIHYHRDLCIRNIVKER
RCGAKTSAGTFCGCDLVSWLIEVGLASDRGEAVIYGDRLVQGGVIQHITNEYEFRDEYLFYRFLQKSPEQ
SPPAINANTLQQERYKEIEHSSPPSHSPKT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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