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Report for CCDS46298.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
46298.1 |
Public |
Homo sapiens |
2 |
C2orf74 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:339804](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:46298.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:339804](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 2 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55
Review status: Reviewed (by RefSeq, Havana and CCDS collaboration) Sequence IDs included in CCDS 46298.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000426997.5 |
ENSP00000398725.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000426997.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000398725.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000426997](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000398725](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000464909.2 |
ENSP00000482798.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000464909.2](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000482798.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000464909](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000482798](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001143960.3 |
NP_001137432.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001143960.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001137432.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001143960](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001137432](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001137432.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001316317.2 |
NP_001303246.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001316317.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001303246.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001316317](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001303246](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001303246.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001367069.1 |
NP_001353998.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001367069.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001353998.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001367069](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001353998](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001353998.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001367070.1 |
NP_001353999.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001367070.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001353999.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001367070](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001353999](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001353999.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001367071.1 |
NP_001354000.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001367071.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001354000.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001367071](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001354000](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001354000.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 46298.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (348 nt): ATGCAAGTCATGAACTTGAATGTGCCGATGAGGCCTGGCATTCTTGTCCAGAGACAGAGTAAGGAAGTGT TGGCCACACCCTTAGAAAACAGAAGGGACATGGAGGCAGAAGAGGAGAACCAAATAAATGAGAAGCAAGA GCCTGAGAATGCTGGAGAAACTGGTCAAGAAGAGGATGATGGTTTGCAGAAAATACACACATCTGTCACT AGAACTCCTTCAGTTGTTGAAAGCCAAAAAAGACCTTTAAAAGGAGTGACATTTTCTAGGGAGGTAATTG TTGTGGATCTTGGGAATGAATACCCTACACCTCGAAGCTATACTCGAGAACATAAAGAGAGGAAATGA
Translation (115 aa): MQVMNLNVPMRPGILVQRQSKEVLATPLENRRDMEAEEENQINEKQEPENAGETGQEEDDGLQKIHTSVT RTPSVVESQKRPLKGVTFSREVIVVDLGNEYPTPRSYTREHKERK
|