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Report for CCDS46097.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46097.1 Public Homo sapiens 19 ZNF283 24 110 108 CCDS HistoryNCBI Gene:284349Re-query CCDS DB by CCDS ID:46097.1Re-query CCDS DB by GeneID:284349See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46097.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000324461.9 ENSP00000327314.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000324461.9Link to Ensembl Protein Viewer:ENSP00000327314.7Re-query CCDS DB by Nucleotide ID:ENST00000324461Re-query CCDS DB by Protein ID:ENSP00000327314
Original member Current member EBI ENST00000618787.5 ENSP00000484852.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000618787.5Link to Ensembl Protein Viewer:ENSP00000484852.1Re-query CCDS DB by Nucleotide ID:ENST00000618787Re-query CCDS DB by Protein ID:ENSP00000484852
Original member Current member NCBI NM_181845.2 NP_862828.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_181845.2Link to Protein Sequence:NP_862828.1Re-query CCDS DB by Nucleotide ID:NM_181845Re-query CCDS DB by Protein ID:NP_862828Link to BLAST:NP_862828.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_862828.1 679 Q8N7M2 679 100% 0 0

Chromosomal Locations for CCDS 46097.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 43833505 43833626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43835505 43835592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43837053 43837179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43846939 43848641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2040 nt):
ATGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGTGCGATCTTGGCTCACTGCAAGCTCCGCCTC
CTGGGTTCACGCTATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGTTCTGGCTTTTCTGGATT
CTGTGCTTCACCAATAGAGGAATCCCATGGAGCATTAATTAGTTCTTGCAATTCCAGAACCATGACTGAT
GGGTTGGTGACATTCAGGGATGTGGCCATCGACTTCTCTCAGGAGGAGTGGGAATGCCTGGACCCTGCTC
AGAGGGACTTGTACGTGGATGTAATGTTGGAGAACTATAGTAACTTGGTGTCACTGGATTTGGAGTCAAA
AACGTATGAGACCAAAAAAATATTTTCAGAAAATGATATTTTTGAAATAAATTTTTCCCAGTGGGAGATG
AAGGACAAAAGTAAAACCCTTGGCCTTGAGGCATCCATCTTCAGAAATAATTGGAAGTGCAAAAGCATAT
TCGAGGGACTAAAAGGACATCAAGAGGGATACTTCAGTCAAATGATAATCAGCTATGAAAAAATACCTTC
TTACAGAAAAAGTAAATCTCTTACTCCACATCAAAGAATTCATAATACAGAGAAATCCTATGTTTGTAAG
GAATGTGGGAAGGCTTGCAGTCATGGCTCAAAACTTGTTCAACATGAGAGAACTCATACAGCTGAAAAAC
ACTTTGAATGTAAAGAATGTGGGAAGAATTATTTAAGTGCCTATCAACTCAATGTGCATCAGAGATTTCA
TACTGGTGAGAAACCCTATGAGTGTAAGGAATGTGGGAAGACCTTTAGCTGGGGATCAAGCCTTGTTAAA
CATGAGAGAATTCACACTGGTGAGAAACCCTATGAATGTAAAGAATGTGGGAAGGCCTTTAGTCGTGGCT
ATCACCTTACCCAACATCAGAAAATTCATACTGGTGTGAAATCTTATAAATGTAAGGAATGTGGGAAGGC
CTTTTTTTGGGGCTCAAGCCTTGCTAAACATGAGATAATTCATACAGGTGAGAAACCTTATAAATGTAAA
GAATGTGGGAAGGCCTTCAGTCGTGGCTATCAGCTTACTCAGCATCAGAAAATCCATACTGGTAAGAAAC
CTTATGAATGTAAAATATGTGGAAAGGCTTTTTGTTGGGGCTATCAACTTACTCGACATCAGATATTTCA
TACTGGTGAGAAACCCTATGAATGCAAGGAATGTGGGAAGGCTTTTAATTGCGGATCAAGTCTTATTCAA
CATGAAAGAATTCATACTGGTGAGAAACCTTATGAATGTAAAGAATGTGGAAAGGCCTTTAGTCGTGGCT
ATCACCTTTCTCAACATCAGAAAATCCATACTGGTGAGAAACCTTTTGAATGTAAGGAATGTGGGAAGGC
CTTTAGTTGGGGTTCAAGCCTTGTTAAACATGAGAGAGTTCATACTGGTGAGAAATCCCATGAATGTAAA
GAATGCGGAAAGACCTTTTGTAGTGGGTATCAACTTACTCGACATCAGGTATTTCACACTGGTGAGAAAC
CCTATGAATGTAAGGAATGTGGGAAGGCTTTTAATTGTGGATCAAGCCTTGTTCAACATGAAAGAATCCA
TACAGGGGAGAAACCCTATGAATGTAAAGAATGTGGGAAGGCTTTTAGTCGTGGCTATCACCTTACTCAA
CATCAGAAAATTCATACCGGTGAGAAACCTTTCAAATGTAAGGAATGTGGGAAGGCCTTCAGTTGGGGTT
CAAGCCTAGTTAAGCATGAGAGAGTCCATACTAATGAGAAGTCTTATGAATGTAAAGACTGTGGGAAGGC
CTTTGGTAGTGGCTATCAACTTAGTGTTCATCAGAGATTTCATACTGGTGAGAAGCTTTATCAACGTAAG
GAATTCGGGAAGACCTTTACTTGTGGCTCAAAACTTGTTCATGAGAGAACTCATAGTAATGATAAACCCT
ACAAATATAACGAATGTGGGGAAGCCTTTCTGTGGACAACTTACTCAAATGAGAAAATTGATACTGATGA
AACCTTATGA

Translation (679 aa):
MESRSVAQAGVQWCDLGSLQAPPPGFTLFSCLSLLSSWDYSSGFSGFCASPIEESHGALISSCNSRTMTD
GLVTFRDVAIDFSQEEWECLDPAQRDLYVDVMLENYSNLVSLDLESKTYETKKIFSENDIFEINFSQWEM
KDKSKTLGLEASIFRNNWKCKSIFEGLKGHQEGYFSQMIISYEKIPSYRKSKSLTPHQRIHNTEKSYVCK
ECGKACSHGSKLVQHERTHTAEKHFECKECGKNYLSAYQLNVHQRFHTGEKPYECKECGKTFSWGSSLVK
HERIHTGEKPYECKECGKAFSRGYHLTQHQKIHTGVKSYKCKECGKAFFWGSSLAKHEIIHTGEKPYKCK
ECGKAFSRGYQLTQHQKIHTGKKPYECKICGKAFCWGYQLTRHQIFHTGEKPYECKECGKAFNCGSSLIQ
HERIHTGEKPYECKECGKAFSRGYHLSQHQKIHTGEKPFECKECGKAFSWGSSLVKHERVHTGEKSHECK
ECGKTFCSGYQLTRHQVFHTGEKPYECKECGKAFNCGSSLVQHERIHTGEKPYECKECGKAFSRGYHLTQ
HQKIHTGEKPFKCKECGKAFSWGSSLVKHERVHTNEKSYECKDCGKAFGSGYQLSVHQRFHTGEKLYQRK
EFGKTFTCGSKLVHERTHSNDKPYKYNECGEAFLWTTYSNEKIDTDETL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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