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Report for CCDS11991.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11991.1 Public Homo sapiens 18 SERPINB8 24 110 108 CCDS HistoryNCBI Gene:5271Re-query CCDS DB by CCDS ID:11991.1Re-query CCDS DB by GeneID:5271See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11991.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000353706.6 ENSP00000331368.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000353706.6Link to Ensembl Protein Viewer:ENSP00000331368.3Re-query CCDS DB by Nucleotide ID:ENST00000353706Re-query CCDS DB by Protein ID:ENSP00000331368
Original member Current member EBI ENST00000397985.7 ENSP00000381072.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000397985.7Link to Ensembl Protein Viewer:ENSP00000381072.2Re-query CCDS DB by Nucleotide ID:ENST00000397985Re-query CCDS DB by Protein ID:ENSP00000381072
Original member Current member NCBI NM_001366198.1 NP_001353127.1 Accepted alive Link to Nucleotide Sequence:NM_001366198.1Link to Protein Sequence:NP_001353127.1Re-query CCDS DB by Nucleotide ID:NM_001366198Re-query CCDS DB by Protein ID:NP_001353127Link to BLAST:NP_001353127.1
Original member Current member NCBI NM_002640.4 NP_002631.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002640.4Link to Protein Sequence:NP_002631.3Re-query CCDS DB by Nucleotide ID:NM_002640Re-query CCDS DB by Protein ID:NP_002631Link to BLAST:NP_002631.3
Original member Current member NCBI NM_198833.2 NP_942130.1 Accepted alive Link to Nucleotide Sequence:NM_198833.2Link to Protein Sequence:NP_942130.1Re-query CCDS DB by Nucleotide ID:NM_198833Re-query CCDS DB by Protein ID:NP_942130Link to BLAST:NP_942130.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001353127.1 374 P50452-1 374 100% 0 0
NP_002631.3 374 P50452-1 374 100% 0 0
NP_942130.1 374 P50452-1 374 100% 0 0

Chromosomal Locations for CCDS 11991.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 63978309 63978476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63979801 63979938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63981721 63981838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63983579 63983721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63985093 63985245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63986874 63987278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1125 nt):
ATGGATGACCTCTGTGAAGCAAATGGCACTTTTGCCATCAGCTTATTTAAAATATTGGGGGAAGAGGACA
ACTCAAGAAACGTATTCTTCTCTCCCATGAGCATCTCCTCTGCCCTGGCCATGGTCTTCATGGGGGCAAA
GGGAAGCACTGCAGCCCAGATGTCCCAGGCACTTTGTTTATACAAAGACGGAGATATTCACCGAGGTTTC
CAGTCACTTCTCAGTGAAGTTAACAGAACTGGCACTCAGTACTTGCTTAGAACTGCCAACAGACTCTTTG
GAGAAAAGACGTGTGATTTCCTTCCAGACTTTAAAGAATACTGTCAGAAGTTCTATCAGGCAGAGCTGGA
GGAGTTGTCCTTTGCTGAAGACACTGAAGAGTGCAGGAAGCATATAAATGACTGGGTGGCAGAGAAGACT
GAAGGTAAGATTTCAGAGGTACTGGATGCTGGGACAGTCGATCCCCTGACAAAGCTGGTCCTTGTGAATG
CCATTTATTTCAAGGGAAAGTGGAATGAGCAATTTGACAGAAAGTACACAAGGGGAATGCTCTTTAAAAC
CAACGAGGAAAAAAAGACAGTGCAGATGATGTTTAAGGAAGCTAAGTTTAAAATGGGGTATGCGGATGAG
GTACACACCCAGGTCCTGGAGCTGCCCTATGTGGAAGAGGAGCTGAGCATGGTCATTCTGCTTCCCGATG
ACAACACGGACCTCGCCGTGGTGGAAAAAGCACTTACATATGAGAAATTCAAAGCCTGGACAAATTCAGA
AAAGTTGACAAAAAGTAAGGTTCAAGTTTTCCTTCCCAGATTAAAGCTGGAGGAGAGTTATGACTTGGAG
CCTTTCCTTCGAAGATTAGGAATGATCGATGCTTTTGACGAAGCCAAGGCAGACTTTTCTGGAATGTCAA
CTGAGAAGAATGTGCCTCTGTCCAAGGTTGCCCACAAGTGCTTCGTGGAGGTCAATGAGGAAGGCACAGA
GGCTGCCGCAGCCACTGCTGTGGTCAGGAATTCCCGGTGCAGCAGAATGGAGCCAAGATTCTGTGCAGAC
CACCCTTTTCTTTTCTTCATCAGGCACCACAAAACCAACTGCATCTTGTTCTGTGGCAGGTTCTCTTCTC
CGTAA

Translation (374 aa):
MDDLCEANGTFAISLFKILGEEDNSRNVFFSPMSISSALAMVFMGAKGSTAAQMSQALCLYKDGDIHRGF
QSLLSEVNRTGTQYLLRTANRLFGEKTCDFLPDFKEYCQKFYQAELEELSFAEDTEECRKHINDWVAEKT
EGKISEVLDAGTVDPLTKLVLVNAIYFKGKWNEQFDRKYTRGMLFKTNEEKKTVQMMFKEAKFKMGYADE
VHTQVLELPYVEEELSMVILLPDDNTDLAVVEKALTYEKFKAWTNSEKLTKSKVQVFLPRLKLEESYDLE
PFLRRLGMIDAFDEAKADFSGMSTEKNVPLSKVAHKCFVEVNEEGTEAAAATAVVRNSRCSRMEPRFCAD
HPFLFFIRHHKTNCILFCGRFSSP


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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