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Report for CCDS82067.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82067.1 Public Homo sapiens 17 SLC25A35 24 110 108 CCDS HistoryNCBI Gene:399512Re-query CCDS DB by CCDS ID:82067.1Re-query CCDS DB by GeneID:399512See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82067.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000577745.2 ENSP00000464231.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000577745.2Link to Ensembl Protein Viewer:ENSP00000464231.1Re-query CCDS DB by Nucleotide ID:ENST00000577745Re-query CCDS DB by Protein ID:ENSP00000464231
Original member Current member NCBI NM_001320870.2 NP_001307799.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001320870.2Link to Protein Sequence:NP_001307799.1Re-query CCDS DB by Nucleotide ID:NM_001320870Re-query CCDS DB by Protein ID:NP_001307799Link to BLAST:NP_001307799.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001307799.1 300 Q3KQZ1-1 300 100% 0 0

Chromosomal Locations for CCDS 82067.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 8290505 8290678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 8290842 8290976 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 8291333 8291485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 8292523 8292588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 8294433 8294807 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (903 nt):
ATGGACTTCTTGATGAGTGGCCTGGCAGCCTGCGGGGCCTGTGTATTCACCAATCCCCTGGAGGTGGTGA
AGACCAGGATGCAGTTGCAAGGAGAACTGCAGGCCCCTGGCACATACCAGCGGCACTACCGAAATGTCTT
CCATGCCTTCATCACCATCGGCAAGGTGGATGGCCTTGCTGCCCTGCAGAAAGGCCTGGCCCCCGCCCTC
TTGTACCAGTTCCTGATGAATGGCATCCGACTGGGCACCTATGGGCTGGCTGAGGCTGGGGGCTACCTGC
ACACAGCCGAAGGCACCCACAGTCCTGCCCGCAGCGCAGCAGCTGGGGCCATGGCTGGGGTCATGGGAGC
CTACTTGGGGAGCCCCATCTACATGGTGAAGACACACCTGCAGGCACAGGCAGCCTCAGAAATTGCTGTA
GGGCACCAGTATAAGCATCAGGGCATGTTTCAGGCGCTAACCGAGATTGGCCAGAAACATGGTCTGGTGG
GGTTATGGCGTGGGGCTCTGGGCGGCCTGCCCCGAGTTATCGTCGGTTCCTCCACCCAGCTGTGCACCTT
CTCATCCACCAAGGACCTCCTGAGCCAGTGGGAGATCTTTCCTCCCCAGAGCTGGAAGTTGGCGCTGGTG
GCTGCCATGATGAGTGGCATTGCAGTTGTCTTGGCCATGGCACCCTTTGATGTGGCCTGCACAAGGCTCT
ACAACCAGCCCACAGATGCACAGGGCAAGGGCCTCATGTACCGGGGGATACTGGACGCTCTGCTGCAGAC
AGCTCGGACCGAGGGCATTTTTGGCATGTACAAGGGTATAGGTGCCTCCTACTTCCGCCTCGGCCCCCAC
ACCATCCTCTCCCTCTTCTTCTGGGACCAGCTGCGCTCCCTCTACTACACAGACACTAAATAA

Translation (300 aa):
MDFLMSGLAACGACVFTNPLEVVKTRMQLQGELQAPGTYQRHYRNVFHAFITIGKVDGLAALQKGLAPAL
LYQFLMNGIRLGTYGLAEAGGYLHTAEGTHSPARSAAAGAMAGVMGAYLGSPIYMVKTHLQAQAASEIAV
GHQYKHQGMFQALTEIGQKHGLVGLWRGALGGLPRVIVGSSTQLCTFSSTKDLLSQWEIFPPQSWKLALV
AAMMSGIAVVLAMAPFDVACTRLYNQPTDAQGKGLMYRGILDALLQTARTEGIFGMYKGIGASYFRLGPH
TILSLFFWDQLRSLYYTDTK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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