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Report for CCDS10834.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10834.1 Public Homo sapiens 16 FHOD1 24 110 108 CCDS HistoryNCBI Gene:29109Re-query CCDS DB by CCDS ID:10834.1Re-query CCDS DB by GeneID:29109See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10834.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000258201.9 ENSP00000258201.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000258201.9Link to Ensembl Protein Viewer:ENSP00000258201.4Re-query CCDS DB by Nucleotide ID:ENST00000258201Re-query CCDS DB by Protein ID:ENSP00000258201
Original member Current member NCBI NM_013241.3 NP_037373.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_013241.3Link to Protein Sequence:NP_037373.2Re-query CCDS DB by Nucleotide ID:NM_013241Re-query CCDS DB by Protein ID:NP_037373Link to BLAST:NP_037373.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_037373.2 1164 Q9Y613 1164 100% 0 0

Chromosomal Locations for CCDS 10834.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 67229636 67229718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67229793 67229990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67230066 67230228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67230314 67230506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67230601 67230791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67231188 67231349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67231430 67231549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67231637 67231819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67232039 67232194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67233657 67234267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67234357 67234472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67236557 67236733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67236966 67237114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67237239 67237382 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67237475 67237569 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67237657 67237768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67238034 67238128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67238202 67238307 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67238380 67238447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67238903 67238967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67239348 67239454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67247210 67247410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3495 nt):
ATGGCGGGCGGGGAAGACCGCGGGGACGGAGAGCCGGTATCAGTGGTGACCGTGAGGGTGCAGTACCTGG
AAGACACCGACCCCTTCGCATGTGCCAACTTTCCGGAGCCGCGCCGGGCCCCCACCTGCAGCCTGGACGG
GGCGCTGCCCTTGGGCGCGCAGATACCCGCGGTGCACCGCCTGCTGGGAGCGCCGCTCAAGTTGGAGGAT
TGTGCTCTGCAAGTGTCTCCCTCCGGATACTACCTGGACACCGAGCTGTCCCTGGAAGAGCAGCGGGAGA
TGCTGGAGGGCTTCTATGAAGAGATCAGCAAAGGGCGGAAGCCCACGCTGATCCTTCGGACCCAGCTCTC
TGTGAGGGTCAACGCTATCTTGGAAAAGCTGTATAGCTCCAGTGGTCCTGAGCTCCGCCGCTCCCTCTTC
TCACTGAAGCAGATCTTCCAGGAGGACAAAGACCTGGTGCCTGAATTTGTGCATTCAGAGGGGCTGAGCT
GCCTGATCCGTGTGGGTGCTGCTGCCGACCACAACTACCAGAGCTACATCCTTAGAGCGCTCGGCCAGCT
GATGCTCTTTGTGGATGGAATGCTGGGGGTGGTGGCCCACAGTGACACTATTCAGTGGCTGTACACATTG
TGTGCCAGCCTGTCCCGCTTGGTGGTGAAGACAGCCCTGAAGCTGCTGTTGGTGTTTGTAGAATACTCCG
AAAACAACGCACCGCTGTTCATCCGTGCAGTGAACTCTGTGGCCAGCACCACCGGTGCTCCTCCCTGGGC
CAATCTGGTGTCCATCCTGGAGGAGAAGAATGGCGCTGACCCTGAGTTGTTGGTGTACACGGTCACCCTC
ATCAACAAGACGCTGGCGGCGCTCCCGGACCAGGACTCCTTCTACGATGTGACGGATGCACTGGAGCAGC
AGGGCATGGAAGCGCTGGTCCAGCGCCACCTGGGCACTGCGGGCACTGACGTCGACCTGCGCACGCAGCT
TGTGCTCTACGAGAACGCCCTGAAATTGGAGGATGGAGACATCGAAGAAGCCCCAGGCGCTGGTGGGCGG
CGGGAACGACGAAAGCCTTCTTCTGAGGAGGGCAAGAGGAGCCGCCGTTCTCTGGAAGGCGGGGGCTGCC
CCGCGCGTGCCCCGGAACCTGGCCCCACAGGCCCCGCCTCACCGGTAGGCCCCACCTCTTCCACCGGCCC
CGCCCTGCTGACAGGCCCCGCCTCCAGCCCTGTGGGCCCTCCCTCCGGTCTCCAAGCTTCAGTGAACCTT
TTTCCTACCATCTCTGTGGCACCCTCAGCTGACACCTCCAGCGAGAGGAGCATCTACAAAGCCCGGTTCC
TGGAGAATGTGGCGGCAGCAGAAACAGAGAAGCAGGTTGCGCTGGCCCAGGGCCGGGCAGAGACACTTGC
CGGGGCCATGCCCAATGAGGCGGGTGGACACCCAGATGCCCGGCAACTCTGGGACTCCCCAGAGACAGCC
CCTGCAGCCAGAACACCCCAGAGCCCTGCCCCCTGTGTCCTGCTCCGGGCCCAGCGAAGCCTTGCACCAG
AGCCCAAGGAGCCACTGATACCAGCAAGCCCCAAGGCTGAGCCCATCTGGGAGCTCCCTACCCGTGCACC
CAGGCTCTCTATTGGGGACCTGGACTTTTCAGATCTAGGGGAGGATGAAGACCAGGACATGCTGAATGTA
GAGTCTGTGGAGGCTGGGAAAGACATCCCAGCTCCCTCACCCCCACTGCCCCTGCTCTCGGGAGTACCCC
CCCCTCCCCCACTTCCACCTCCCCCACCCATCAAAGGCCCCTTCCCACCACCTCCACCTCTACCTCTGGC
TGCCCCTCTTCCCCATTCAGTGCCTGACAGCTCAGCCCTCCCCACTAAGAGGAAGACAGTAAAACTTTTC
TGGCGTGAGCTGAAGCTGGCTGGGGGCCATGGAGTCTCTGCAAGCCGCTTTGGGCCCTGCGCCACCCTCT
GGGCTTCACTGGACCCTGTCTCAGTGGACACGGCCCGACTGGAACACCTCTTTGAGTCTCGTGCCAAAGA
GGTGCTGCCCTCCAAGAAAGCTGGAGAGGGCCGCCGGACAATGACCACAGTGCTGGACCCCAAGCGCAGC
AACGCCATCAACATCGGCCTAACCACACTGCCACCTGTGCATGTCATTAAGGCTGCTCTGCTCAACTTTG
ATGAGTTTGCTGTCAGCAAGGATGGCATTGAGAAGCTACTGACCATGATGCCCACGGAGGAAGAGCGGCA
GAAGATTGAGGAAGCCCAGCTGGCCAACCCTGACATACCCCTGGGCCCAGCCGAGAACTTCCTGATGACT
CTTGCCTCCATTGGCGGCCTCGCTGCTCGTCTACAACTCTGGGCCTTCAAGCTGGACTATGACAGCATGG
AGCGGGAAATTGCTGAGCCACTGTTTGACCTGAAAGTGGGTATGGAACAGCTGGTACAGAATGCCACCTT
CCGCTGCATCCTGGCTACCCTCCTAGCGGTGGGCAACTTCCTCAATGGCTCCCAGAGCAGCGGCTTTGAG
CTGAGCTACCTGGAGAAGGTGTCAGAGGTGAAGGACACGGTGCGTCGACAGTCACTGCTACACCATCTCT
GCTCCCTAGTGCTCCAGACCCGGCCTGAGTCCTCTGACCTCTATTCAGAAATCCCTGCCCTGACCCGCTG
TGCCAAGGTGGACTTTGAACAGCTGACTGAGAACCTGGGGCAGCTGGAGCGCCGGAGCCGGGCAGCCGAG
GAGAGCCTGCGGAGCTTGGCCAAGCATGAGCTGGCCCCAGCCCTGCGTGCCCGCCTCACCCACTTCCTGG
ACCAGTGTGCCCGCCGTGTTGCCATGCTAAGGATAGTGCACCGCCGTGTCTGCAATAGGTTCCATGCCTT
CCTGCTCTACCTGGGCTACACCCCGCAGGCGGCCCGTGAAGTGCGCATCATGCAGTTCTGCCACACGCTG
CGGGAATTTGCGCTTGAGTATCGGACTTGCCGGGAACGAGTGCTACAGCAGCAGCAGAAGCAGGCCACAT
ACCGTGAGCGCAACAAGACCCGGGGACGCATGATCACCGAGACAGAGAAGTTCTCAGGTGTGGCTGGGGA
AGCCCCCAGCAACCCCTCTGTCCCAGTAGCAGTGAGCAGCGGGCCAGGCCGGGGAGATGCTGACAGTCAT
GCTAGTATGAAGAGTCTGCTGACCAGCAGGCCTGAGGACACCACACACAATCGCCGCAGCAGAGGCATGG
TCCAGAGCAGCTCCCCAATCATGCCCACAGTGGGGCCCTCCACTGCATCCCCAGAAGAACCCCCAGGCTC
CAGTTTACCCAGTGATACATCAGATGAGATCATGGACCTTCTGGTGCAGTCAGTGACCAAGAGCAGTCCT
CGTGCCTTAGCTGCTAGGGAACGCAAGCGTTCCCGCGGCAACCGCAAGTCTTTGAGAAGGACGTTGAAGA
GTGGGCTCGGAGATGACCTGGTGCAGGCACTGGGACTAAGCAAGGGTCCTGGCCTGGAGGTGTGA

Translation (1164 aa):
MAGGEDRGDGEPVSVVTVRVQYLEDTDPFACANFPEPRRAPTCSLDGALPLGAQIPAVHRLLGAPLKLED
CALQVSPSGYYLDTELSLEEQREMLEGFYEEISKGRKPTLILRTQLSVRVNAILEKLYSSSGPELRRSLF
SLKQIFQEDKDLVPEFVHSEGLSCLIRVGAAADHNYQSYILRALGQLMLFVDGMLGVVAHSDTIQWLYTL
CASLSRLVVKTALKLLLVFVEYSENNAPLFIRAVNSVASTTGAPPWANLVSILEEKNGADPELLVYTVTL
INKTLAALPDQDSFYDVTDALEQQGMEALVQRHLGTAGTDVDLRTQLVLYENALKLEDGDIEEAPGAGGR
RERRKPSSEEGKRSRRSLEGGGCPARAPEPGPTGPASPVGPTSSTGPALLTGPASSPVGPPSGLQASVNL
FPTISVAPSADTSSERSIYKARFLENVAAAETEKQVALAQGRAETLAGAMPNEAGGHPDARQLWDSPETA
PAARTPQSPAPCVLLRAQRSLAPEPKEPLIPASPKAEPIWELPTRAPRLSIGDLDFSDLGEDEDQDMLNV
ESVEAGKDIPAPSPPLPLLSGVPPPPPLPPPPPIKGPFPPPPPLPLAAPLPHSVPDSSALPTKRKTVKLF
WRELKLAGGHGVSASRFGPCATLWASLDPVSVDTARLEHLFESRAKEVLPSKKAGEGRRTMTTVLDPKRS
NAINIGLTTLPPVHVIKAALLNFDEFAVSKDGIEKLLTMMPTEEERQKIEEAQLANPDIPLGPAENFLMT
LASIGGLAARLQLWAFKLDYDSMEREIAEPLFDLKVGMEQLVQNATFRCILATLLAVGNFLNGSQSSGFE
LSYLEKVSEVKDTVRRQSLLHHLCSLVLQTRPESSDLYSEIPALTRCAKVDFEQLTENLGQLERRSRAAE
ESLRSLAKHELAPALRARLTHFLDQCARRVAMLRIVHRRVCNRFHAFLLYLGYTPQAAREVRIMQFCHTL
REFALEYRTCRERVLQQQQKQATYRERNKTRGRMITETEKFSGVAGEAPSNPSVPVAVSSGPGRGDADSH
ASMKSLLTSRPEDTTHNRRSRGMVQSSSPIMPTVGPSTASPEEPPGSSLPSDTSDEIMDLLVQSVTKSSP
RALAARERKRSRGNRKSLRRTLKSGLGDDLVQALGLSKGPGLEV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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