NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS54015.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
54015.1 Public Homo sapiens 16 BEAN1 24 110 108 CCDS HistoryNCBI Gene:146227Re-query CCDS DB by CCDS ID:54015.1Re-query CCDS DB by GeneID:146227See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 54015.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000536005.7 ENSP00000442793.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000536005.7Link to Ensembl Protein Viewer:ENSP00000442793.2Re-query CCDS DB by Nucleotide ID:ENST00000536005Re-query CCDS DB by Protein ID:ENSP00000442793
Original member Current member NCBI NM_001178020.3 NP_001171491.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001178020.3Link to Protein Sequence:NP_001171491.1Re-query CCDS DB by Nucleotide ID:NM_001178020Re-query CCDS DB by Protein ID:NP_001171491Link to BLAST:NP_001171491.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001171491.1 259 Q3B7T3-1 259 100% 0 0

Chromosomal Locations for CCDS 54015.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 66437677 66437701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 66469602 66469865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 66477560 66477710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 66480586 66480925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (780 nt):
ATGTCCTTCAAACGTCCCTGCCCCTTAGCACGATACAACCGCACCAGCTACTTCTACCCCACATTCTCAG
AGAGCTCGGAGCACAGCCATCTGCTCGTGTCCCCCGTGCTGGTGGCGAGTGCCGTCATAGGTGTGGTCAT
CATCCTCTCCTGCATCACCATCATTGTGGGCAGCATCCGCAGGGACAGGCAGGCCCGGCTTCAGCGGCAC
CGCCACCGCCACCACCGCCACCACCACCACCATCATCACCACCGCCGGCGTCGACACCGAGAGTACGAGC
ACGGCTACGTGTCGGACGAGCACACATACAGCCGCTCAAGCCGCAGGATGCGCTATGCCTGCAGCTCCTC
AGAGGACTGGCCCCCACCCTTGGACATCAGCTCTGACGGGGACGTGGATGCCACGGTGCTCAGGGAGCTG
TACCCAGATTCTCCACCAGGCTACGAGGAGTGTGTGGGGCCAGGGGCCACTCAGCTGTATGTCCCCACGG
ACGCACCACCACCCTACTCGCTGACTGATTCCTGCCCCACGCTGGATGGCACCTCCGACTCAGGCAGCGG
CCACAGCCCTGGCCGACACCAGCAGGAGCAGAGGACCCCGGCCCAAGGTGGCCTTCACACGGTCTCCATG
GACACCCTTCCCCCCTACGAGGCTGTGTGCGGGGCTGGCCCCCCATCAGGCCTGCTGCCACTGCCGGGCC
CAGACCCAGGGCCAAGGGGCTCCCAGGGCTCACCCACCCCAACCCGGGCCCCAGCCTCTGGCCCAGAGAG
GATTGTGTGA

Translation (259 aa):
MSFKRPCPLARYNRTSYFYPTFSESSEHSHLLVSPVLVASAVIGVVIILSCITIIVGSIRRDRQARLQRH
RHRHHRHHHHHHHHRRRRHREYEHGYVSDEHTYSRSSRRMRYACSSSEDWPPPLDISSDGDVDATVLREL
YPDSPPGYEECVGPGATQLYVPTDAPPPYSLTDSCPTLDGTSDSGSGHSPGRHQQEQRTPAQGGLHTVSM
DTLPPYEAVCGAGPPSGLLPLPGPDPGPRGSQGSPTPTRAPASGPERIV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH