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Report for CCDS73744.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
73744.1 |
Public |
Homo sapiens |
15 |
SLC24A1 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:9187](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:73744.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:9187](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 15 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 73744.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000537259.5 |
ENSP00000439693.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000537259.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000439693.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000537259](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000439693](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001301033.2 |
NP_001287962.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001301033.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001287962.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001301033](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001287962](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001287962.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 73744.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (3039 nt): ATGGGGAAATTGATCAGGATGGGGCCGCAAGAGAGGTGGTTACTCCGGACAAAGCGGCTTCATTGGAGTC GCCTCCTCTTCTTACTGGGAATGTTGATCATCGGTTCTACTTATCAGCACCTTAGGAGACCCCGGGGCCT TTCCTCATTGTGGGCAGCAGTCTCTTCTCATCAGCCTATAAAACTGGCCAGTCGGGACCTCTCCAGTGAA GAGATGATGATGATGAGCAGCAGCCCTTCAAAACCTAGCTCCGAAATGGGGGGTAAGATGCTGGTACCCC AAGCCTCAGTGGGCAGTGATGAAGCAACACTGAGCATGACAGTGGAGAATATCCCCAGTATGCCTAAAAG AACAGCCAAGATGATCCCAACAACAACCAAGAATAATTACAGCCCAACAGCAGCAGGTACAGAAAGAAGG AAGGAAGACACCCCAACATCCAGTAGAACACTGACTTACTACACCTCAACTTCAAGCAGACAAATAGTAA AAAAGTATACCCCAACACCCAGGGGAGAAATGAAGAGCTACAGCCCAACTCAAGTGAGGGAAAAGGTGAA GTATACTCCTTCCCCACGTGGTAGAAGAGTAGGCACTTACGTGCCGTCCACATTCATGACAATGGAAACA AGCCATGCGATCACCCCCAGGACAACAGTGAAAGACAGTGACATTACAGCAACCTATAAAATACTCGAAA CCAACTCTCTTAAGAGAATAATGGAGGAAACCACCCCAACCACTCTCAAGGGAATGTTTGATAGCACCCC AACTTTTCTGACACATGAGGTAGAAGCAAACGTCTTGACTTCTCCAAGGAGCGTCATGGAAAAAAACAAC CTGTTTCCCCCCAGAAGAGTGGAAAGTAACAGCTCAGCCCATCCCTGGGGGTTAGTGGGAAAGAGCAACC CGAAGACTCCCCAGGGAACAGTCCTGTTGCATACCCCAGCCACCTCTGAGGGGCAGGTGACAATAAGCAC CATGACAGGCAGCAGCCCAGCAGAAACCAAAGCCTTCACTGCTGCCTGGAGTCTTAGGAATCCTTCACCC AGGACCAGTGTATCAGCCATCAAAACAGCCCCAGCCATAGTCTGGAGGCTGGCAAAGAAACCTTCCACAG CACCCAGCACCTCAACAACCCCTACGGTCAGGGCAAAGCTGACCATGCAGGTCCATCACTGTGTGGTTGT GAAGCCAACCCCAGCCATGCTCACCACTCCCTCCCCAAGCCTCACAACAGCCCTGCTCCCAGAGGAGCTC AGTCCTAGTCCCTCAGTGCTGCCTCCCAGCTTGCCAGACCTCCACCCCAAGGGAGAGTACCCCCCAGATC TGTTCAGTGTGGAGGAGCGGCGGCAGGGCTGGGTGGTCCTGCACGTTTTTGGCATGATGTATGTGTTTGT GGCCTTGGCCATTGTTTGCGACGAGTACTTCGTTCCAGCCCTGGGTGTCATCACAGACAAGCTGCAGATC TCCGAGGATGTGGCAGGCGCCACATTCATGGCTGCTGGAGGCTCTGCTCCTGAGCTCTTCACCTCCCTCA TCGGTGTCTTCATTTCCCACAGCAACGTGGGCATTGGTACCATTGTGGGCTCTGCTGTGTTCAACATTCT CTTTGTCATTGGCACTTGTTCCCTCTTCTCCCGAGAGATCCTCAACCTCACCTGGTGGCCCTTATTCCGT GATGTCTCCTTCTACATCCTTGACCTGATAATGCTCATCCTCTTCTTCCTGGACAGCCTCATTGCCTGGT GGGAGAGCCTGCTGCTGCTGCTGGCCTATGCCTTCTATGTGTTCACCATGAAGTGGAACAAGCATATCGA GGTCTGGGTGAAGGAGCAGCTCAGCAGGAGGCCAGTGGCCAAGGTCATGGCCTTAGAAGACCTCAGCAAG CTCCCGTCCTTGCTGACCCGAGGGAGCAGCTCGACCTCTCTGCACAACAGCACCATCCGCAGCACCATCT ACCAGCTCATGCTCCACAGCCTGGACCCCCTGAGGGAAGTTCGCCTTGCCAAGGAGAAGGAGGAGGAGAG CTTGAATCAAGGGGCCAGAGCCCAACCCCAGGCCAAAGCAGAAAGCAAACCAGAAGAGGAGGAGCCAGCC AAGCTCCCTGCGGTCACGGTCACACCAGCCCCTGTTCCAGACATCAAGGGAGATCAGAAGGAGAATCCAG GCGGTCAGGAAGATGTGGCTGAGGCCGAGAGCACAGGTGAAATGCCAGGCGAAGAGGGCGAAACTGCTGG TGAAGGTGAAACTGAAGAGAAAAGTGGAGGTGAAACTCAACCAGAAGGTGAAGGTGAAACTGAAACACAA GGAAAAGGAGAAGAATGTGAAGATGAAAATGAAGCAGAAGGAAAAGGAGACAATGAAGGTGAAGATGAGG GTGAAATCCACGCAGAAGATGGTGAAATGAAAGGTAATGAAGGTGAAACTGAAAGCCAGGAACTCAGTGC TGAAAATCACGGTGAAGCCAAAAATGATGAGAAAGGTGTAGAAGATGGAGGGGGAAGTGATGGAGGGGAT AGCGAAGAGGAGGAAGAGGAGGAGGAAGAGCAGGAGGAAGAGGAGGAGGAGGAAGAGCAGGAGGAAGAGG AGGAGGAGGAGGAGGAAGAGGAGGAGAAGGGAAATGAAGAGCCTCTGTCCCTGGACTGGCCTGAAACCAG GCAGAAGCAGGCCATTTACCTCTTCCTTCTGCCCATCGTGTTCCCACTGTGGCTGACAGTCCCCGACGTC CGAAGGCAGGAGTCTAGGAAGTTTTTTGTTTTCACCTTCCTGGGATCTATCATGTGGATAGCCATGTTCT CATACCTCATGGTGTGGTGGGCTCACCAGGTTGGTGAAACAATAGGGATTTCTGAAGAGATCATGGGCCT GACAATCCTTGCAGCAGGCACATCAATTCCTGACCTCATCACCAGTGTGATTGTCGCTCGAAAAGGCCTG GGAGACATGGCTGTGTCAAGCTCTGTGGGCAGTAACATATTTGATATCACTGTGGGAGTTGGAAGCTGTG AAATGTTTCAGCATGGTGCTATTCACTAA
Translation (1012 aa): MGKLIRMGPQERWLLRTKRLHWSRLLFLLGMLIIGSTYQHLRRPRGLSSLWAAVSSHQPIKLASRDLSSE EMMMMSSSPSKPSSEMGGKMLVPQASVGSDEATLSMTVENIPSMPKRTAKMIPTTTKNNYSPTAAGTERR KEDTPTSSRTLTYYTSTSSRQIVKKYTPTPRGEMKSYSPTQVREKVKYTPSPRGRRVGTYVPSTFMTMET SHAITPRTTVKDSDITATYKILETNSLKRIMEETTPTTLKGMFDSTPTFLTHEVEANVLTSPRSVMEKNN LFPPRRVESNSSAHPWGLVGKSNPKTPQGTVLLHTPATSEGQVTISTMTGSSPAETKAFTAAWSLRNPSP RTSVSAIKTAPAIVWRLAKKPSTAPSTSTTPTVRAKLTMQVHHCVVVKPTPAMLTTPSPSLTTALLPEEL SPSPSVLPPSLPDLHPKGEYPPDLFSVEERRQGWVVLHVFGMMYVFVALAIVCDEYFVPALGVITDKLQI SEDVAGATFMAAGGSAPELFTSLIGVFISHSNVGIGTIVGSAVFNILFVIGTCSLFSREILNLTWWPLFR DVSFYILDLIMLILFFLDSLIAWWESLLLLLAYAFYVFTMKWNKHIEVWVKEQLSRRPVAKVMALEDLSK LPSLLTRGSSSTSLHNSTIRSTIYQLMLHSLDPLREVRLAKEKEEESLNQGARAQPQAKAESKPEEEEPA KLPAVTVTPAPVPDIKGDQKENPGGQEDVAEAESTGEMPGEEGETAGEGETEEKSGGETQPEGEGETETQ GKGEECEDENEAEGKGDNEGEDEGEIHAEDGEMKGNEGETESQELSAENHGEAKNDEKGVEDGGGSDGGD SEEEEEEEEEQEEEEEEEEQEEEEEEEEEEEEKGNEEPLSLDWPETRQKQAIYLFLLPIVFPLWLTVPDV RRQESRKFFVFTFLGSIMWIAMFSYLMVWWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGL GDMAVSSSVGSNIFDITVGVGSCEMFQHGAIH
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