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Report for CCDS41957.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41957.1 Public Homo sapiens 14 KTN1 24 110 108 CCDS HistoryNCBI Gene:3895Re-query CCDS DB by CCDS ID:41957.1Re-query CCDS DB by GeneID:3895See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41957.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000395314.8 ENSP00000378725.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000395314.8Link to Ensembl Protein Viewer:ENSP00000378725.3Re-query CCDS DB by Nucleotide ID:ENST00000395314Re-query CCDS DB by Protein ID:ENSP00000378725
Original member Current member NCBI NM_001079521.2 NP_001072989.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001079521.2Link to Protein Sequence:NP_001072989.1Re-query CCDS DB by Nucleotide ID:NM_001079521Re-query CCDS DB by Protein ID:NP_001072989Link to BLAST:NP_001072989.1
Current member NCBI NM_001402682.1 NP_001389611.1 Accepted alive Link to Nucleotide Sequence:NM_001402682.1Link to Protein Sequence:NP_001389611.1Re-query CCDS DB by Nucleotide ID:NM_001402682Re-query CCDS DB by Protein ID:NP_001389611Link to BLAST:NP_001389611.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001072989.1 1357 Q86UP2-1 1357 100% 0 0
NP_001389611.1 1357 Q86UP2-1 1357 100% 0 0

Chromosomal Locations for CCDS 41957.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 55612049 55612571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55616517 55616654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55617964 55618134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55619182 55619312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55627912 55628028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55629957 55630097 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55633235 55633341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55634526 55634658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55636449 55636536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55637198 55637364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55637779 55637847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55639185 55639222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55639913 55640003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55640374 55640442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55640933 55640970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55641127 55641208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55641692 55641760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55646973 55647007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55648025 55648115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55648802 55648870 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55649776 55649813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55650328 55650418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55650569 55650637 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55651890 55651927 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55652850 55652940 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55653017 55653085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55653559 55653596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55656042 55656132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55658546 55658614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55659666 55659703 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55661522 55661612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55663955 55664041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55667241 55667330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55670729 55670809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55671566 55671655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55671785 55671877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55672630 55672701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55672929 55673012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55673172 55673255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55675835 55675918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55678352 55678444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55679565 55679685 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55684099 55684103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4074 nt):
ATGGAGTTTTATGAGTCAGCATATTTTATTGTTCTTATTCCTTCAATAGTTATTACAGTAATTTTCCTCT
TCTTCTGGCTTTTCATGAAAGAAACATTATATGATGAAGTTCTTGCAAAACAGAAAAGAGAACAAAAGCT
TATTCCTACCAAAACAGATAAAAAGAAAGCAGAAAAGAAAAAGAATAAAAAGAAAGAAATCCAGAATGGA
AACCTCCATGAATCCGACTCTGAGAGTGTACCTCGAGACTTTAAATTATCAGATGCTTTGGCAGTAGAAG
ATGATCAAGTTGCACCTGTTCCATTGAATGTCGTTGAAACTTCAAGTAGTGTTAGGGAAAGAAAAAAGAA
GGAAAAGAAACAAAAGCCTGTGCTTGAAGAGCAGGTCATCAAAGAAAGTGACGCATCAAAGATTCCTGGC
AAAAAAGTAGAACCTGTCCCAGTTACTAAACAGCCCACCCCTCCCTCTGAAGCAGCTGCCTCGAAGAAGA
AACCAGGGCAGAAGAAGTCTAAAAATGGAAGCGATGACCAGGATAAAAAGGTGGAAACTCTCATGGTACC
ATCAAAAAGGCAAGAAGCATTGCCCCTCCACCAAGAGACTAAACAAGAAAGTGGATCAGGGAAGAAGAAA
GCTTCATCAAAGAAACAAAAGACAGAAAATGTCTTCGTAGATGAACCCCTTATTCATGCAACTACTTATA
TTCCTTTGATGGATAATGCTGACTCAAGTCCTGTGGTAGATAAGAGAGAGGTTATTGATTTGCTTAAACC
TGACCAAGTAGAAGGGATCCAGAAATCTGGGACTAAAAAACTGAAGACCGAAACTGACAAAGAAAATGCT
GAAGTGAAGTTTAAAGATTTTCTTCTGTCCTTGAAGACTATGATGTTTTCTGAAGATGAGGCTCTTTGTG
TTGTAGACTTGCTAAAGGAGAAGTCTGGTGTAATACAAGATGCTTTAAAGAAGTCAAGTAAGGGAGAATT
GACTACGCTTATACATCAGCTTCAAGAAAAGGACAAGTTACTCGCTGCTGTGAAGGAAGATGCTGCTGCT
ACAAAGGATCGGTGTAAGCAGTTAACCCAGGAAATGATGACAGAGAAAGAAAGAAGCAATGTGGTTATAA
CAAGGATGAAAGATCGAATTGGAACATTAGAAAAGGAACATAATGTATTTCAAAACAAAATACATGTCAG
TTATCAAGAGACTCAACAGATGCAGATGAAGTTTCAGCAAGTTCGTGAGCAGATGGAGGCAGAGATAGCT
CACTTGAAGCAGGAAAATGGTATACTGAGAGATGCAGTCAGCAACACTACAAATCAACTGGAAAGCAAGC
AGTCTGCAGAACTAAATAAACTACGCCAGGATTATGCTAGGTTGGTGAATGAGCTGACTGAGAAAACAGG
AAAGCTACAGCAAGAGGAAGTCCAAAAGAAGAATGCTGAGCAAGCAGCTACTCAGTTGAAGGTTCAACTA
CAAGAAGCTGAGAGAAGGTGGGAAGAAGTTCAGAGCTACATCAGGAAGAGAACAGCGGAACATGAGGCAG
CACAGCAAGATTTACAGAGTAAATTTGTGGCCAAAGAAAATGAAGTACAGAGTCTGCATAGTAAGCTTAC
AGATACCTTGGTATCAAAACAACAGTTGGAGCAAAGACTAATGCAGTTAATGGAATCAGAGCAGAAAAGG
GTGAACAAAGAAGAGTCTCTACAAATGCAGGTTCAGGATATTTTGGAGCAGAATGAGGCTTTGAAAGCTC
AAATTCAGCAGTTCCATTCCCAGATAGCAGCCCAGACCTCCGCTTCAGTTCTAGCAGAAGAATTACATAA
AGTGATTGCAGAAAAGGATAAGCAGATAAAACAGACTGAAGATTCTTTAGCAAGTGAACGTGATCGTTTA
ACAAGTAAAGAAGAGGAACTTAAGGATATACAGAATATGAATTTCTTATTAAAAGCTGAAGTGCAGAAAT
TACAGGCCCTGGCAAATGAGCAGGCTGCTGCTGCACATGAATTGGAGAAGATGCAACAAAGTGTTTATGT
TAAAGATGATAAAATAAGATTGCTGGAAGAGCAACTACAACATGAAATTTCAAACAAAATGGAAGAATTT
AAGATTCTAAATGACCAAAACAAAGCATTAAAATCAGAAGTTCAGAAGCTACAGACTCTTGTTTCTGAAC
AGCCTAATAAGGATGTTGTGGAACAAATGGAAAAATGCATTCAAGAAAAAGATGAGAAGTTAAAGACTGT
GGAAGAATTACTTGAAACTGGACTTATTCAGGTGGCAACTAAAGAAGAGGAGCTGAATGCAATAAGAACA
GAAAATTCATCTCTGACAAAAGAAGTTCAAGACTTAAAAGCTAAGCAAAATGATCAGGTTTCTTTTGCCT
CTCTAGTTGAAGAACTTAAGAAAGTGATCCATGAGAAAGATGGAAAGATCAAGTCTGTAGAAGAGCTTCT
GGAGGCAGAACTTCTCAAAGTTGCTAACAAGGAGAAAACTGTTCAGGATTTGAAACAGGAAATAAAGGCT
CTAAAAGAAGAAATAGGAAATGTCCAGCTTGAAAAGGCTCAACAGTTATCTATCACTTCCAAAGTTCAGG
AGCTTCAGAACTTATTAAAAGGAAAAGAGGAACAGATGAATACCATGAAGGCTGTTTTGGAAGAGAAAGA
GAAAGACCTAGCCAATACAGGGAAGTGGTTACAGGATCTTCAAGAAGAAAATGAATCTTTAAAAGCACAT
GTTCAGGAAGTAGCACAACATAACTTGAAAGAGGCCTCTTCTGCATCACAGTTTGAAGAACTTGAGATTG
TGTTGAAAGAAAAGGAAAATGAATTGAAGAGGTTAGAAGCCATGCTAAAAGAGAGGGAGAGTGATCTTTC
TAGCAAAACACAGCTGTTACAGGATGTACAAGATGAAAACAAATTGTTTAAGTCCCAAATTGAGCAGCTT
AAACAACAAAACTACCAACAGGCATCTTCTTTTCCCCCTCATGAAGAATTATTAAAAGTAATTTCAGAAA
GAGAGAAAGAAATAAGTGGTCTCTGGAATGAGTTAGATTCTTTGAAGGATGCAGTTGAACACCAGAGGAA
GAAAAACAATGACCTTCGGGAGAAAAACTGGGAAGCAATGGAAGCATTGGCATCAACTGAAAAAATGCTG
CAGGACAAAGTGAACAAGACTTCCAAGGAAAGGCAGCAACAGGTGGAAGCTGTTGAGTTGGAGGCTAAAG
AAGTTCTCAAAAAATTATTTCCAAAGGTGTCTGTCCCTTCTAATTTGAGTTATGGTGAATGGTTGCATGG
ATTTGAAAAAAAGGCAAAAGAATGTATGGCTGGAACTTCAGGGTCAGAGGAGGTTAAGGTTCTAGAGCAC
AAGTTGAAAGAAGCTGATGAAATGCACACATTGTTACAGCTAGAGTGTGAAAAATACAAATCCGTCCTTG
CAGAAACAGAAGGAATTTTACAGAAGCTACAGAGAAGTGTTGAGCAAGAAGAAAATAAATGGAAAGTTAA
GGTCGATGAATCACACAAGACTATTAAACAGATGCAGTCATCATTTACATCTTCAGAACAAGAGCTAGAG
CGATTAAGAAGCGAAAATAAGGATATTGAAAATCTGAGAAGAGAACGAGAACATTTGGAAATGGAACTAG
AAAAGGCAGAGATGGAACGATCTACCTATGTTACAGAAGTCAGAGAGCTGAAAGATCTGTTGACTGAATT
GCAGAAAAAACTTGATGATTCATATTCTGAAGCAGTAAGACAGAATGAAGAGCTAAATTTGTTGAAGGCA
CAGTTAAATGAAACACTCACAAAACTTAGAACTGAACAAAATGAAAGACAGAAGGTAGCTGGTGATTTGC
ATAAGGCTCAACAGTCACTGGAGCTTATCCAGTCAAAAATAGTAAAAGCTGCTGGAGACACTACTGTTAT
TGAAAATAGTGATGTTTCCCCAGAAACGGAGTCTTCTGAGAAGGAGACAATGTCTGTAAGTCTAAATCAG
ACTGTAACACAGTTACAGCAGTTGCTTCAGGCGGTAAACCAACAGCTCACAAAGGAGAAAGAGCACTACC
AGGTGTTAGAGTGA

Translation (1357 aa):
MEFYESAYFIVLIPSIVITVIFLFFWLFMKETLYDEVLAKQKREQKLIPTKTDKKKAEKKKNKKKEIQNG
NLHESDSESVPRDFKLSDALAVEDDQVAPVPLNVVETSSSVRERKKKEKKQKPVLEEQVIKESDASKIPG
KKVEPVPVTKQPTPPSEAAASKKKPGQKKSKNGSDDQDKKVETLMVPSKRQEALPLHQETKQESGSGKKK
ASSKKQKTENVFVDEPLIHATTYIPLMDNADSSPVVDKREVIDLLKPDQVEGIQKSGTKKLKTETDKENA
EVKFKDFLLSLKTMMFSEDEALCVVDLLKEKSGVIQDALKKSSKGELTTLIHQLQEKDKLLAAVKEDAAA
TKDRCKQLTQEMMTEKERSNVVITRMKDRIGTLEKEHNVFQNKIHVSYQETQQMQMKFQQVREQMEAEIA
HLKQENGILRDAVSNTTNQLESKQSAELNKLRQDYARLVNELTEKTGKLQQEEVQKKNAEQAATQLKVQL
QEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKR
VNKEESLQMQVQDILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKVIAEKDKQIKQTEDSLASERDRL
TSKEEELKDIQNMNFLLKAEVQKLQALANEQAAAAHELEKMQQSVYVKDDKIRLLEEQLQHEISNKMEEF
KILNDQNKALKSEVQKLQTLVSEQPNKDVVEQMEKCIQEKDEKLKTVEELLETGLIQVATKEEELNAIRT
ENSSLTKEVQDLKAKQNDQVSFASLVEELKKVIHEKDGKIKSVEELLEAELLKVANKEKTVQDLKQEIKA
LKEEIGNVQLEKAQQLSITSKVQELQNLLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQEENESLKAH
VQEVAQHNLKEASSASQFEELEIVLKEKENELKRLEAMLKERESDLSSKTQLLQDVQDENKLFKSQIEQL
KQQNYQQASSFPPHEELLKVISEREKEISGLWNELDSLKDAVEHQRKKNNDLREKNWEAMEALASTEKML
QDKVNKTSKERQQQVEAVELEAKEVLKKLFPKVSVPSNLSYGEWLHGFEKKAKECMAGTSGSEEVKVLEH
KLKEADEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEENKWKVKVDESHKTIKQMQSSFTSSEQELE
RLRSENKDIENLRREREHLEMELEKAEMERSTYVTEVRELKDLLTELQKKLDDSYSEAVRQNEELNLLKA
QLNETLTKLRTEQNERQKVAGDLHKAQQSLELIQSKIVKAAGDTTVIENSDVSPETESSEKETMSVSLNQ
TVTQLQQLLQAVNQQLTKEKEHYQVLE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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