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Report for CCDS32086.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32086.1 Public Homo sapiens 14 FBXO34 24 110 108 CCDS HistoryNCBI Gene:55030Re-query CCDS DB by CCDS ID:32086.1Re-query CCDS DB by GeneID:55030See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32086.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000313833.5 ENSP00000313159.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000313833.5Link to Ensembl Protein Viewer:ENSP00000313159.4Re-query CCDS DB by Nucleotide ID:ENST00000313833Re-query CCDS DB by Protein ID:ENSP00000313159
Original member Current member EBI ENST00000440021.1 ENSP00000394117.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000440021.1Link to Ensembl Protein Viewer:ENSP00000394117.1Re-query CCDS DB by Nucleotide ID:ENST00000440021Re-query CCDS DB by Protein ID:ENSP00000394117
Original member Current member EBI ENST00000680682.1 ENSP00000504946.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000680682.1Link to Ensembl Protein Viewer:ENSP00000504946.1Re-query CCDS DB by Nucleotide ID:ENST00000680682Re-query CCDS DB by Protein ID:ENSP00000504946
Original member Current member EBI ENST00000681904.1 ENSP00000505815.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000681904.1Link to Ensembl Protein Viewer:ENSP00000505815.1Re-query CCDS DB by Nucleotide ID:ENST00000681904Re-query CCDS DB by Protein ID:ENSP00000505815
Original member Current member EBI ENST00000679934.1 ENSP00000505918.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000679934.1Link to Ensembl Protein Viewer:ENSP00000505918.1Re-query CCDS DB by Nucleotide ID:ENST00000679934Re-query CCDS DB by Protein ID:ENSP00000505918
Original member Current member EBI ENST00000681074.1 ENSP00000506304.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000681074.1Link to Ensembl Protein Viewer:ENSP00000506304.1Re-query CCDS DB by Nucleotide ID:ENST00000681074Re-query CCDS DB by Protein ID:ENSP00000506304
Original member Current member EBI ENST00000681400.1 ENSP00000506349.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000681400.1Link to Ensembl Protein Viewer:ENSP00000506349.1Re-query CCDS DB by Nucleotide ID:ENST00000681400Re-query CCDS DB by Protein ID:ENSP00000506349
Original member Current member EBI ENST00000680658.1 ENSP00000506499.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000680658.1Link to Ensembl Protein Viewer:ENSP00000506499.1Re-query CCDS DB by Nucleotide ID:ENST00000680658Re-query CCDS DB by Protein ID:ENSP00000506499
Original member Current member NCBI NM_017943.4 NP_060413.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_017943.4Link to Protein Sequence:NP_060413.2Re-query CCDS DB by Nucleotide ID:NM_017943Re-query CCDS DB by Protein ID:NP_060413Link to BLAST:NP_060413.2
Original member Current member NCBI NM_152231.2 NP_689417.1 Accepted alive Link to Nucleotide Sequence:NM_152231.2Link to Protein Sequence:NP_689417.1Re-query CCDS DB by Nucleotide ID:NM_152231Re-query CCDS DB by Protein ID:NP_689417Link to BLAST:NP_689417.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060413.2 711 Q9NWN3 711 100% 0 0
NP_689417.1 711 Q9NWN3 711 100% 0 0

Chromosomal Locations for CCDS 32086.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 55350391 55352526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2136 nt):
ATGCACCTAAAGCCATATTGGAAGCTCCAGAAGAAAGAGCACCCCCCGGAAGTCAGCAGGGAAACGCAGA
GAACTCCTATGAACCACCAAAAGGCTGTAAATGATGAAACATGCAAAGCTAGCCACATAACATCAAGTGT
CTTTCCTTCAGCCTCTCTCGGTAAAGCATCATCTCGAAAGCCATTTGGGATCCTTTCTCCAAATGTTCTG
TGCAGTATGAGTGGGAAGAGTCCTGTAGAGAGCAGCTTGAATGTTAAAACCAAAAAGAATGCACCATCTG
CAACGATCCACCAGGGCGAAGAAGAAGGACCACTTGATATCTGGGCTGTTGTGAAACCTGGAAATACCAA
GGAAAAAATTGCATTCTTTGCATCCCACCAGTGTAGTAACAGGATAGGATCTATGAAAATAAAAAGTTCC
TGGGATATTGATGGGAGAGCTACTAAGAGAAGGAAAAAATCAGGGGATCTTAAAAAAGCCAAGGTACAGG
TGGAAAGGATGAGGGAGGTTAACAGCAGGTGCTACCAACCTGAGCCTTTTGCATGTGGCATTGAGCACTG
TTCTGTGCACTATGTGAGTGACAGTGGGGATGGAGTCTATGCTGGGAGGCCTCTGTCAGTTATACAGATG
GTTGCCTTCTTGGAGCAAAGAGCCAGTGCTCTGCTAGCTAGCTGTTCAAAAAACTGCACAAACTCACCTG
CAATTGTGAGGTTTTCTGGCCAATCCAGAGGTGTGCCTGCAGTGTCTGAGTCCTATTCTGCCCCAGGAGC
TTGTGAAGAACCCACAGAAAGGGGAAATCTTGAGGTTGGTGAACCACAGAGCGAACCAGTCCGTGTCCTT
GACATGGTAGCCAAGTTGGAGTCTGAGTGCCTGAAGCGGCAGGGCCAGCGTGAGCCTGGGAGCCTCTCAA
GGAATAACAGCTTCCGTCGAAATGTGGGCAGAGTATTGCTTGCAAATAGCACTCAGGCTGATGAAGGCAA
AACAAAGAAAGGCGTCTTGGAGGCACCTGACACTCAGGTGAATCCTGTGGGGTCTGTATCTGTGGATTGT
GGCCCTTCAAGAGCTGATCGTTGTTCTCCTAAGGAGGACCAGGCCTGGGACGGTGCTTCTCAGGACTGCC
CCCCATTGCCAGCAGGAGTGAGTTTCCACATAGACAGTGCAGAGTTAGAGCCGGGTTCGCAAACTGCCGT
GAAAAACAGCAACAGATATGATGTGGAAATGACAGATGAACTCGTTGGGTTACCTTTTTCCTCTCATACC
TATTCCCAAGCCTCTGAATTGCCCACAGATGCTGTTGATTGTATGAGCAGAGAGCTTGTGTCCCTTACTA
GCCGAAATCCTGATCAAAGAAAAGAATCTTTGTGCATTAGTATCACTGTGTCCAAGGTAGACAAAGACCA
GCCTTCCATTTTAAACTCCTGTGAAGACCCAGTTCCAGGGATGTTGTTTTTTTTGCCACCTGGTCAGCAC
TTGTCAGACTATTCCCAGTTGAATGAAAGCACAACAAAAGAGTCTTCAGAGGCCAGCCAGCTTGAAGATG
CTGCTGGGGGTGACAGTGCATCTGAGGAAAAAAGTGGGTCTGCTGAGCCATTTGTACTGCCAGCCTCTTC
TGTGGAAAGTACATTACCAGTGCTTGAGGCATCCAGTTGGAAGAAGCAGGTGTCGCATGACTTCCTGGAG
ACCAGGTTTAAAATCCAGCAGCTTTTGGAGCCTCAGCAGTACATGGCTTTTCTGCCCCACCACATTATGG
TAAAAATCTTCAGGTTACTTCCCACCAAGAGTTTAGTGGCCCTTAAATGTACCTGCTGCTATTTCAAGTT
TATCATTGAGTACTACAATATCAGGCCAGCAGATTCTCGCTGGGTTCGAGATCCACGCTATAGAGAGGAT
CCTTGCAAACAGTGCAAGAAAAAGTATGTGAAAGGGGATGTGTCCCTGTGCCGATGGCACCCCAAGCCCT
ATTGCCAGGCATTGCCCTATGGGCCAGGGTATTGGATGTGCTGCCACCGGTCTCAGAAAGGATTCCCTGG
CTGTAAGCTGGGGCTTCATGACAATCACTGGGTTCCTGCCTGCCACAGCTTTAATCGGGCAATCCATAAG
AAAGCAAAAGGGACTGAAGCTGAAGAGGAATACTAA

Translation (711 aa):
MHLKPYWKLQKKEHPPEVSRETQRTPMNHQKAVNDETCKASHITSSVFPSASLGKASSRKPFGILSPNVL
CSMSGKSPVESSLNVKTKKNAPSATIHQGEEEGPLDIWAVVKPGNTKEKIAFFASHQCSNRIGSMKIKSS
WDIDGRATKRRKKSGDLKKAKVQVERMREVNSRCYQPEPFACGIEHCSVHYVSDSGDGVYAGRPLSVIQM
VAFLEQRASALLASCSKNCTNSPAIVRFSGQSRGVPAVSESYSAPGACEEPTERGNLEVGEPQSEPVRVL
DMVAKLESECLKRQGQREPGSLSRNNSFRRNVGRVLLANSTQADEGKTKKGVLEAPDTQVNPVGSVSVDC
GPSRADRCSPKEDQAWDGASQDCPPLPAGVSFHIDSAELEPGSQTAVKNSNRYDVEMTDELVGLPFSSHT
YSQASELPTDAVDCMSRELVSLTSRNPDQRKESLCISITVSKVDKDQPSILNSCEDPVPGMLFFLPPGQH
LSDYSQLNESTTKESSEASQLEDAAGGDSASEEKSGSAEPFVLPASSVESTLPVLEASSWKKQVSHDFLE
TRFKIQQLLEPQQYMAFLPHHIMVKIFRLLPTKSLVALKCTCCYFKFIIEYYNIRPADSRWVRDPRYRED
PCKQCKKKYVKGDVSLCRWHPKPYCQALPYGPGYWMCCHRSQKGFPGCKLGLHDNHWVPACHSFNRAIHK
KAKGTEAEEEY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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