NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS53850.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
53850.1 Public Homo sapiens 12 ZNF605 24 110 108 CCDS HistoryNCBI Gene:100289635Re-query CCDS DB by CCDS ID:53850.1Re-query CCDS DB by GeneID:100289635See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 53850.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000392321.3 ENSP00000376135.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000392321.3Link to Ensembl Protein Viewer:ENSP00000376135.3Re-query CCDS DB by Nucleotide ID:ENST00000392321Re-query CCDS DB by Protein ID:ENSP00000376135
Original member Current member NCBI NM_001164715.2 NP_001158187.1 Accepted alive Link to Nucleotide Sequence:NM_001164715.2Link to Protein Sequence:NP_001158187.1Re-query CCDS DB by Nucleotide ID:NM_001164715Re-query CCDS DB by Protein ID:NP_001158187Link to BLAST:NP_001158187.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001158187.1 672 Q86T29-2 672 100% 0 0

Chromosomal Locations for CCDS 53850.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 132925373 132927162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 132932713 132932805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 132933035 132933155 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 132945621 132945635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2019 nt):
ATGATCCAGTCACAGATATCATTTGAGGATGTGGCTGTGGATTTCACGCTGGAGGAATGGCAGCTACTTA
ATCCTACTCAGAAGAACTTGTACAGAGATGTGATGTTGGAGAACTATAGCAATCTGGTTTTCTTGGGTTT
TCAAATTCTCAAACCTGATGCAATGTTCAAACTGGAACAACAAGATCCATGGATAATAGGTCAAGAAATC
CTAAATCAGAACTTTTCAGAAGTCTGGCTAGATAATCCCAAAATGTGGCTCCGAGATAATCAAGACAACC
TTAAAAGTATGGAGAGAGGCCATAAATATGATGTTTTTGGAAAAATATTTAATTCAAGCATAAACATTGT
TCATGTAGGACTGCGATCCCATAAATGTGGCACAGGAGAAAAAAGTTTGAAATGTCCTTTTGATTTGCTT
ATTCCAAAAAATAATTGTGAAAGAAAGAAAATTGATGAACTCAATAAGAAATTATTGTTCTGTATCAAAC
CTGGCAGAACCCATGGTGGGATAAAATACTGTGATTGCAGTACATGTAGAAAATCCAGCAACGAAGAGCC
ATGGCTCACTGCTAATCACATAACACACACAGGAGTCTATTTATGCATGGAATGTGGCAGATTTTTTAAC
AAGAAGTCACAACTTGTTATACACCAGAGAACTCATACAGGAGAGAAGCCCTATCAATGCAGTGAGTGTG
GAAAAGCCTTTTCACAGAAGTCACTGCTCACGGTTCATCAAAGAACTCACTCAGGAGAAAAACCGCATGG
GTGCAGCGAATGTCAGAAAGCTTTTAGTAGGAAGTCACTCCTCATTTTACATCAGAGAATTCATACTGGA
GAGAAGCCGTATGGATGCAGTGAATGTGGAAAAGCCTTCAGTAGGAAGTCGCAGCTTAAAAGACATCAGA
TAACGCACACAATAGAGAAACCCTACAGTTGCAGTGAGTGTGGGAAAGCATTCTCCCAGAAATTAAAACT
CATCACACATCAGAGAGCGCACACAGGAGAGAAACCCTATCCATGTAGTCACTGTGGAAAAGCCTTCTTT
TGGAAGTCGCAGCTGATTACTCATCAGAGGACCCACACAGGGAAGAAACCTTACGGATGTGGTGAGTGTC
AAAAAGCCTTCAGCAGGAACTCACTTCTCATTAGGCATCAGAGGATTCATACAGGAGAGAAGCCCTACGA
ATGCAACGAATGTGGTGAAGCCTTCATCAGAAAACCACAGCTGATTAAACATCAGATAACTCACACAGGA
GAGAAGAACTATCGATGCAGTGATTGTGAGGAGGCCTTCTTTAAGAAGTCAGAGTTAATAAGACATCAAA
AAATTCACTTAGGAGAGAAACCATATGGATGCATTCAATGTGGGAAAACCTTCTTTGGGAAGTCCCAGCT
CCTAACGCATCACAGAACACACACTGGGGAGAAGCCTTATGAATGCAGTGAGTGTGGGAAGGCCTTCACC
CAGAAGTCAAGCCTGATATCACATCAGAGAACACATACAGGTGAGAAACCCTATGAATGCAGTGAATGCA
GGAAAACCTTCAGTGAGAAGTCAAGTCTCATTCATCATCAGAGAACCCATACTGGAGAAAAGCCCTTTGA
ATGTAGTGAATGTAGGAAAGCTTTTGCCTGGAAGCCACAGCTTCTTAGGCATCAGAGAATTCATACAGGG
GAGAAACCCTATGAATGCAGTGAATGTGGGAAAGCATTTGTTCAGAAAGTGCAGCTCATTAAGCATCAAA
GAAATCACACAGGAGAGAAAACCTATGGATGCAGCGATTGTGCAAAAGCTTTCTTTGAGAAGGCACAGCT
GATTATACATCAGAGAATTCATACAGGAGAGAGACCATATAAATGTGGTGAATGTGGGAAATCTTTCACA
AGAAAGTCACACCTTATGAGGCATCAGAGGATTCATACAGGAGATAAATACTATGGATGCAATGAGTGTG
GGACCACCTTCAACAGGAAGTCGCAGCTTATGATACATCAGAGAAATCATATAATATAA

Translation (672 aa):
MIQSQISFEDVAVDFTLEEWQLLNPTQKNLYRDVMLENYSNLVFLGFQILKPDAMFKLEQQDPWIIGQEI
LNQNFSEVWLDNPKMWLRDNQDNLKSMERGHKYDVFGKIFNSSINIVHVGLRSHKCGTGEKSLKCPFDLL
IPKNNCERKKIDELNKKLLFCIKPGRTHGGIKYCDCSTCRKSSNEEPWLTANHITHTGVYLCMECGRFFN
KKSQLVIHQRTHTGEKPYQCSECGKAFSQKSLLTVHQRTHSGEKPHGCSECQKAFSRKSLLILHQRIHTG
EKPYGCSECGKAFSRKSQLKRHQITHTIEKPYSCSECGKAFSQKLKLITHQRAHTGEKPYPCSHCGKAFF
WKSQLITHQRTHTGKKPYGCGECQKAFSRNSLLIRHQRIHTGEKPYECNECGEAFIRKPQLIKHQITHTG
EKNYRCSDCEEAFFKKSELIRHQKIHLGEKPYGCIQCGKTFFGKSQLLTHHRTHTGEKPYECSECGKAFT
QKSSLISHQRTHTGEKPYECSECRKTFSEKSSLIHHQRTHTGEKPFECSECRKAFAWKPQLLRHQRIHTG
EKPYECSECGKAFVQKVQLIKHQRNHTGEKTYGCSDCAKAFFEKAQLIIHQRIHTGERPYKCGECGKSFT
RKSHLMRHQRIHTGDKYYGCNECGTTFNRKSQLMIHQRNHII


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH