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Report for CCDS73381.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73381.1 Public Homo sapiens 11 DIXDC1 24 110 108 CCDS HistoryNCBI Gene:85458Re-query CCDS DB by CCDS ID:73381.1Re-query CCDS DB by GeneID:85458See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73381.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000440460.7 ENSP00000394352.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000440460.7Link to Ensembl Protein Viewer:ENSP00000394352.3Re-query CCDS DB by Nucleotide ID:ENST00000440460Re-query CCDS DB by Protein ID:ENSP00000394352
Original member Current member NCBI NM_001037954.4 NP_001033043.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001037954.4Link to Protein Sequence:NP_001033043.1Re-query CCDS DB by Nucleotide ID:NM_001037954Re-query CCDS DB by Protein ID:NP_001033043Link to BLAST:NP_001033043.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001033043.1 683 Q155Q3-1 683 100% 0 0

Chromosomal Locations for CCDS 73381.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 111937500 111937559 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 111964549 111964678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 111968513 111968638 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 111974023 111974254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 111974876 111974983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 111980737 111980849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 111982339 111982487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 111985232 111985321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 111986871 111986924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 111989005 111989055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 111992415 111992519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 111992951 111993004 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 111993496 111993588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 111993669 111993740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 111995019 111995108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 111995403 111995564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 111996080 111996146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 112016691 112016796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 112017777 112017885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 112018956 112019036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2052 nt):
ATGCTAGCCTGCCTGACCCGAGGGAACTTACTGGACGTCCTGCAGGAGGGCTTCAATGAGCAACAGCTGC
AGGCCTATGTGGCCTGGGTGAATGCACAGCTGAAGAAGAGGCCAGCAGTGAAGCCTGTGCAGGACCTGCG
ACAAGATCTCCGGGATGGGGTGATCCTGGCATATCTCATCGAGATTGTTGCAGGAGAAAAGCTGAGTGGG
GTACAGCTGAGTCCCGGTAACCAACAGGAGATGAAGAATAATGTGGAGAAAGTGCTACAGTTTGTGGCCT
CTAAAAAGATTCGTATGCACCAGACTTCGGCTAAAGATATTGTGGATGGAAACCTGAAGTCTATCATGAG
GCTGGTCCTTGCCTTGGCAGCTCATTTCAAACCTGGCTCCAGCAGGACGGTGAACCAAGGACGGGACTCC
AGAGCCCCTCTGCAAAGTCACCGACCACACTGTGCCACTGCTGTTGCCCAGGGAGCAGCTGCTGCTCTGG
CCGATGTGTGTCATGACATGTCCCGATCAGGACGGGATGTCTTTCGATATAGACAGAGGAACAGCAGCAT
GGATGAGGAAATTGAGAATCCATACTGGAGTGTGCGGGCCCTAGTGCAGCAGTACGAAGGGCAACAAAGG
TCCCCGTCTGAATCCAGCTGCTCCAGCCTGACTTCACCCAGTCCAATCCACAGTGCAAAGAGCGAGTCCA
TTATAACCCAGTCAGAAGAGAAGGCAGATTTTGTGATTATTCCCGCTGAAGGAATAGAGAACAGAACAGA
AGGGACAGATTCTCCATTATCTCGAGACTGGCGGCCAGGGAGCCCTGGAACCTATCTGGAGACCTCATGG
GAAGAACAGCTGTTGGAACAACAAGAATATTTAGAAAAAGAAATGGAGGAAGCAAAGAAAATGATATCAG
GACTACAGGCCTTACTGCTCAATGGATCCTTACCTGAAGATGAACAGGAGAGGCCCTTGGCCCTCTGTGA
ACCAGGTGTCAATCCCGAGGAACAACTGATTATAATCCAAAGTCGTCTGGATCAGAGTATGGAGGAGAAT
CAGGACTTAAAGAAGGAACTGCTGAAATGTAAACAAGAAGCCAGAAACTTACAGGGGATAAAGGATGCCT
TGCAGCAGAGATTGACTCAGCAGGACACATCTGTTCTTCAGCTCAAACAAGAGCTACTGAGGGCAAATAT
GGACAAAGATGAGCTGCACAACCAGAATGTGGATCTGCAGAGGAAGCTAGATGAGAGGAACCGGCTCTTG
GGAGAATATAAAAAAGAGCTGGGGCAGAAGGATCGCCTTCTTCAGCAGCACCAGGCCAAGTTAGAAGAAG
CACTCCGGAAACTCTCTGATGTCAGTTACCACCAGGTGGATCTAGAGCGAGAGCTAGAACACAAAGATGT
CCTCTTGGCTCACTGTATGAAAAGAGAGGCAGATGAGGCGACCAACTACAACAGTCACAACTCTCAAAGC
AATGGTTTTCTCCTTCCAACGGCAGGAAAAGGAGCTACTTCAGTCAGCAACAGAGGGACCAGCGACCTGC
AGCTTGTTCGAGATGCTCTCCGCAGCCTGCGCAACAGCTTCAGTGGCCACGATCCTCAGCACCACACTAT
TGACAGCTTGGAGCAGGGCATTTCTAGCCTCATGGAGCGCCTGCATGTTATGGAGACGCAGAAGAAACAA
GAAAGAAAGGTTCGGGTCAAGTCACCCAGAACTCAAGTAGGTAGTGAATACCGGGAGTCCTGGCCCCCTA
ACTCAAAGTTGCCTCACTCACAGAGCTCTCCAACTGTCAGCAGCACCTGTACTAAAGTGCTCTATTTCAC
TGACCGGTCACTTACGCCCTTCATGGTCAATATACCAAAGAGGTTGGAGGAGGTGACGTTAAAGGATTTT
AAAGCAGCTATTGATCGGGAAGGAAATCACCGGTATCACTTCAAAGCACTGGATCCTGAGTTTGGCACTG
TCAAAGAGGAGATTTTCCATGATGATGATGCCATCCCTGGATGGGAAGGGAAAATTGTAGCTTGGGTGGA
AGAAGACCATGGAGAGAATTAA

Translation (683 aa):
MLACLTRGNLLDVLQEGFNEQQLQAYVAWVNAQLKKRPAVKPVQDLRQDLRDGVILAYLIEIVAGEKLSG
VQLSPGNQQEMKNNVEKVLQFVASKKIRMHQTSAKDIVDGNLKSIMRLVLALAAHFKPGSSRTVNQGRDS
RAPLQSHRPHCATAVAQGAAAALADVCHDMSRSGRDVFRYRQRNSSMDEEIENPYWSVRALVQQYEGQQR
SPSESSCSSLTSPSPIHSAKSESIITQSEEKADFVIIPAEGIENRTEGTDSPLSRDWRPGSPGTYLETSW
EEQLLEQQEYLEKEMEEAKKMISGLQALLLNGSLPEDEQERPLALCEPGVNPEEQLIIIQSRLDQSMEEN
QDLKKELLKCKQEARNLQGIKDALQQRLTQQDTSVLQLKQELLRANMDKDELHNQNVDLQRKLDERNRLL
GEYKKELGQKDRLLQQHQAKLEEALRKLSDVSYHQVDLERELEHKDVLLAHCMKREADEATNYNSHNSQS
NGFLLPTAGKGATSVSNRGTSDLQLVRDALRSLRNSFSGHDPQHHTIDSLEQGISSLMERLHVMETQKKQ
ERKVRVKSPRTQVGSEYRESWPPNSKLPHSQSSPTVSSTCTKVLYFTDRSLTPFMVNIPKRLEEVTLKDF
KAAIDREGNHRYHFKALDPEFGTVKEEIFHDDDAIPGWEGKIVAWVEEDHGEN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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