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Report for CCDS7920.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7920.1 Public Homo sapiens 11 HARBI1 24 110 108 CCDS HistoryNCBI Gene:283254Re-query CCDS DB by CCDS ID:7920.1Re-query CCDS DB by GeneID:283254See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7920.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000326737.3 ENSP00000317743.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000326737.3Link to Ensembl Protein Viewer:ENSP00000317743.3Re-query CCDS DB by Nucleotide ID:ENST00000326737Re-query CCDS DB by Protein ID:ENSP00000317743
Original member Current member NCBI NM_173811.4 NP_776172.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_173811.4Link to Protein Sequence:NP_776172.1Re-query CCDS DB by Nucleotide ID:NM_173811Re-query CCDS DB by Protein ID:NP_776172Link to BLAST:NP_776172.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_776172.1 349 Q96MB7 349 100% 0 0

Chromosomal Locations for CCDS 7920.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 46603530 46603909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 46615568 46616237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1050 nt):
ATGGCTATACCAATAACAGTGCTTGACTGTGACCTCTTGCTATATGGCCGTGGTCACCGGACATTGGACC
GTTTTAAGCTGGATGATGTGACTGATGAATACTTGATGTCCATGTATGGGTTTCCACGGCAGTTCATTTA
TTACTTGGTGGAGCTCTTGGGGGCGAATCTTTCTAGGCCTACTCAGCGATCCAGGGCTATTAGCCCAGAG
ACACAGGTCCTTGCAGCATTGGGTTTTTATACCTCAGGTTCCTTCCAGACTCGGATGGGAGATGCCATTG
GAATCAGTCAGGCGTCTATGAGTCGTTGTGTTGCCAATGTCACTGAAGCACTTGTGGAAAGGGCCTCACA
GTTCATTCGCTTTCCAGCTGATGAAGCCTCCATTCAGGCTCTGAAGGATGAATTCTATGGGTTGGCAGGG
ATGCCAGGGGTGATGGGGGTGGTTGACTGTATCCATGTGGCCATCAAGGCACCAAATGCTGAAGACCTCT
CCTATGTGAACCGAAAAGGCCTGCATTCTTTAAACTGCCTGATGGTGTGTGACATTAGAGGGACACTAAT
GACCGTGGAGACAAACTGGCCCGGCAGCCTACAGGACTGTGCTGTGCTGCAGCAGTCTTCCCTCAGTAGT
CAGTTTGAAGCGGGTATGCACAAAGATAGCTGGCTTCTGGGTGACAGTTCCTTCTTTCTTCGAACCTGGC
TCATGACCCCACTTCACATTCCTGAAACTCCAGCAGAATATCGCTATAACATGGCCCATTCTGCAACTCA
CAGTGTGATTGAGAAGACTTTCCGAACCCTCTGCTCCCGATTCCGCTGCCTGGATGGATCCAAGGGGGCA
CTGCAGTACTCACCAGAGAAATCCAGCCATATCATCTTGGCCTGTTGTGTCCTCCACAACATCTCCCTGG
AGCATGGGATGGATGTTTGGTCCTCTCCAATGACAGGACCCATGGAACAGCCCCCGGAAGAGGAGTATGA
GCACATGGAGTCCCTGGACTTAGAGGCTGACCGTATTCGTCAGGAGCTAATGCTCACTCATTTTAGCTAA

Translation (349 aa):
MAIPITVLDCDLLLYGRGHRTLDRFKLDDVTDEYLMSMYGFPRQFIYYLVELLGANLSRPTQRSRAISPE
TQVLAALGFYTSGSFQTRMGDAIGISQASMSRCVANVTEALVERASQFIRFPADEASIQALKDEFYGLAG
MPGVMGVVDCIHVAIKAPNAEDLSYVNRKGLHSLNCLMVCDIRGTLMTVETNWPGSLQDCAVLQQSSLSS
QFEAGMHKDSWLLGDSSFFLRTWLMTPLHIPETPAEYRYNMAHSATHSVIEKTFRTLCSRFRCLDGSKGA
LQYSPEKSSHIILACCVLHNISLEHGMDVWSSPMTGPMEQPPEEEYEHMESLDLEADRIRQELMLTHFS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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