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Report for CCDS73254.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73254.1 Public Homo sapiens 11 STK33 24 110 108 CCDS HistoryNCBI Gene:65975Re-query CCDS DB by CCDS ID:73254.1Re-query CCDS DB by GeneID:65975See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73254.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000534493.5 ENSP00000436418.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000534493.5Link to Ensembl Protein Viewer:ENSP00000436418.1Re-query CCDS DB by Nucleotide ID:ENST00000534493Re-query CCDS DB by Protein ID:ENSP00000436418
Original member Current member NCBI NM_001289058.2 NP_001275987.1 Accepted alive Link to Nucleotide Sequence:NM_001289058.2Link to Protein Sequence:NP_001275987.1Re-query CCDS DB by Nucleotide ID:NM_001289058Re-query CCDS DB by Protein ID:NP_001275987Link to BLAST:NP_001275987.1
Original member Current member NCBI NM_001352394.2 NP_001339323.1 Accepted alive Link to Nucleotide Sequence:NM_001352394.2Link to Protein Sequence:NP_001339323.1Re-query CCDS DB by Nucleotide ID:NM_001352394Re-query CCDS DB by Protein ID:NP_001339323Link to BLAST:NP_001339323.1
Original member Current member NCBI NM_001352395.2 NP_001339324.1 Accepted alive Link to Nucleotide Sequence:NM_001352395.2Link to Protein Sequence:NP_001339324.1Re-query CCDS DB by Nucleotide ID:NM_001352395Re-query CCDS DB by Protein ID:NP_001339324Link to BLAST:NP_001339324.1

Chromosomal Locations for CCDS 73254.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 8392510 8392710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8413495 8413692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8435494 8435579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8436027 8436139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8440678 8440753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8452822 8452906 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8454744 8454832 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8457341 8457479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8461805 8461909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8464709 8464822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8473163 8473276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8474681 8474782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1422 nt):
ATGTCACAGACATCAAGCATTGGTAGTGCAGAATCTTTAATTTCACTGGAGAGAAAAAAAGAAAAAAATA
TCAACAGAGATATAACCTCCAGGAAAGATTTGCCCTCAAGAACCTCAAATGTAGAGAGAAAAGCATCTCA
GCAACAATGGGGTCGGGGCAACTTTACAGAAGGAAAAGTTCCTCACATAAGGATTGAGAATGGAGCTGCT
ATTGAGGAAATCTATACCTTTGGAAGAATATTGGGAAAAGGGAGCTTTGGAATAGTCATTGAAGCGACAG
ACAAGGAAACAGAAACGAAGTGGGCAATTAAAAAAGTGAACAAAGAAAAGGCTGGAAGCTCTGCTGTGAA
GTTACTTGAACGAGAGGTGAACATTCTGAAAAGTGTAAAACATGAACACATCATACATCTGGAACAAGTA
TTTGAAACGCCAAAGAAAATGTACCTTGTGATGGAGCTTTGTGAGGATGGAGAACTCAAAGAAATTCTGG
ATAGGAAAGGGCATTTCTCAGAGAATGAGACAAGGTGGATCATTCAAAGTCTCGCATCAGCTATAGCATA
TCTTCACAATAATGATATTGTACATAGAGATCTGAAACTGGAAAATATAATGGTTAAAAGCAGTCTTATT
GATGATAACAATGAAATAAACTTAAACATAAAGGTGACTGATTTTGGCTTAGCGGTGAAGAAGCAAAGTA
GGAGTGAAGCCATGCTGCAGGCCACATGTGGGACTCCTATCTATATGGCCCCTGAAGTTATCAGTGCCCA
CGACTATAGCCAGCAGTGTGACATTTGGAGCATAGGCGTCGTAATGTACATGTTATTACGTGGAGAACCA
CCCTTTTTGGCAAGCTCAGAAGAGAAGCTTTTTGAGTTAATAAGAAAAGGAGAACTACATTTTGAAAATG
CAGTCTGGAATTCCATAAGTGACTGTGCTAAAAGTGTTTTGAAACAACTTATGAAAGTAGATCCTGCTCA
CAGAATCACAGCTAAGGAACTACTAGATAACCAGTGGTTAACAGGCAATAAACTTTCTTCGGTGAGACCA
ACCAATGTATTAGAGATGATGAAGGAATGGAAAAATAACCCAGAAAGTGTTGAGGAAAACACAACAGAAG
AGAAGAATAAGCCGTCCACTGAAGAAAAGTTGAAAAGTTACCAACCCTGGGGAAATGTCCCTGATGCCAA
TTACACTTCAGATGAAGAGGAGGAAAAACAGTCTACTGCTTATGAAAAGCAATTTCCTGCAACCAGTAAG
GACAACTTTGATATGTGCAGTTCAAGTTTCACATCTAGCAAACTCCTTCCAGCTGAAATCAAGGGAGAAA
TGGAGAAAACCCCTGTGACTCCAAGCCAAGGAACAGCAACCAAGTACCCTGCTAAATCCGGCGCCCTGTC
CAGAACCAAAAAGAAACTCTAA

Translation (473 aa):
MSQTSSIGSAESLISLERKKEKNINRDITSRKDLPSRTSNVERKASQQQWGRGNFTEGKVPHIRIENGAA
IEEIYTFGRILGKGSFGIVIEATDKETETKWAIKKVNKEKAGSSAVKLLEREVNILKSVKHEHIIHLEQV
FETPKKMYLVMELCEDGELKEILDRKGHFSENETRWIIQSLASAIAYLHNNDIVHRDLKLENIMVKSSLI
DDNNEINLNIKVTDFGLAVKKQSRSEAMLQATCGTPIYMAPEVISAHDYSQQCDIWSIGVVMYMLLRGEP
PFLASSEEKLFELIRKGELHFENAVWNSISDCAKSVLKQLMKVDPAHRITAKELLDNQWLTGNKLSSVRP
TNVLEMMKEWKNNPESVEENTTEEKNKPSTEEKLKSYQPWGNVPDANYTSDEEEEKQSTAYEKQFPATSK
DNFDMCSSSFTSSKLLPAEIKGEMEKTPVTPSQGTATKYPAKSGALSRTKKKL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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