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Report for CCDS7208.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7208.1 Public Homo sapiens 10 RASSF4 24 110 108 CCDS HistoryNCBI Gene:83937Re-query CCDS DB by CCDS ID:7208.1Re-query CCDS DB by GeneID:83937See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7208.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000340258.10 ENSP00000339692.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000340258.10Link to Ensembl Protein Viewer:ENSP00000339692.4Re-query CCDS DB by Nucleotide ID:ENST00000340258Re-query CCDS DB by Protein ID:ENSP00000339692
Original member Current member NCBI NM_032023.4 NP_114412.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032023.4Link to Protein Sequence:NP_114412.2Re-query CCDS DB by Nucleotide ID:NM_032023Re-query CCDS DB by Protein ID:NP_114412Link to BLAST:NP_114412.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_114412.2 321 Q9H2L5-1 321 100% 0 0

Chromosomal Locations for CCDS 7208.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 44970203 44970264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 44971773 44971848 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 44982521 44982663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 44984022 44984113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 44984813 44984970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 44989274 44989375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 44989670 44989721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 44990948 44991069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 44991905 44992002 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 44993269 44993329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (966 nt):
ATGAAGGAAGACTGTCTGCCGAGTTCTCACGTGCCCATCAGTGACAGCAAGTCCATTCAGAAGTCGGAGC
TCTTAGGCCTGCTGAAAACCTACAACTGCTACCATGAGGGCAAGAGCTTCCAGCTGAGACACCGTGAGGA
AGAAGGGACTCTGATCATCGAGGGGCTCCTCAACATTGCCTGGGGGCTGAGGCGGCCCATCCGGCTGCAG
ATGCAGGATGACCGGGAGCAGGTGCACCTCCCCTCCACCTCATGGATGCCCAGACGGCCTAGCTGCCCTC
TAAAGGAGCCATCGCCCCAGAACGGGAACATCACAGCCCAGGGGCCAAGCATTCAGCCAGTGCACAAGGC
TGAGAGTTCCACAGACAGCTCGGGGCCCCTGGAGGAGGCAGAGGAGGCCCCCCAGCTGATGCGGACCAAG
AGCGACGCCAGTTGCATGAGCCAGAGGAGGCCCAAGTGCCGCGCCCCCGGTGAGGCCCAGCGCATCCGGC
GACACCGGTTCTCTATCAACGGCCACTTCTACAATCATAAGACCTCCGTGTTTACTCCAGCCTATGGATC
CGTGACCAATGTGAGGGTCAACAGCACCATGACAACCCTGCAGGTGCTCACCCTGCTGCTGAACAAATTT
AGGGTGGAAGATGGCCCCAGTGAGTTCGCACTCTACATCGTTCACGAGTCTGGGGAGCGGACAAAATTAA
AAGACTGCGAGTACCCGCTGATTTCCAGAATCCTGCATGGGCCATGTGAGAAGATCGCCAGGATCTTCCT
GATGGAAGCTGACTTGGGCGTGGAAGTCCCCCATGAAGTCGCTCAGTACATTAAGTTTGAAATGCCGGTG
CTGGACAGTTTTGTTGAAAAATTAAAAGAAGAGGAAGAAAGAGAAATAATCAAACTGACCATGAAGTTCC
AAGCCCTGCGTCTGACGATGCTGCAGCGCCTGGAGCAGCTGGTGGAGGCCAAGTAA

Translation (321 aa):
MKEDCLPSSHVPISDSKSIQKSELLGLLKTYNCYHEGKSFQLRHREEEGTLIIEGLLNIAWGLRRPIRLQ
MQDDREQVHLPSTSWMPRRPSCPLKEPSPQNGNITAQGPSIQPVHKAESSTDSSGPLEEAEEAPQLMRTK
SDASCMSQRRPKCRAPGEAQRIRRHRFSINGHFYNHKTSVFTPAYGSVTNVRVNSTMTTLQVLTLLLNKF
RVEDGPSEFALYIVHESGERTKLKDCEYPLISRILHGPCEKIARIFLMEADLGVEVPHEVAQYIKFEMPV
LDSFVEKLKEEEEREIIKLTMKFQALRLTMLQRLEQLVEAK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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