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Report for CCDS73014.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73014.1 Public Homo sapiens 1 RHEX 24 110 108 CCDS HistoryNCBI Gene:440712Re-query CCDS DB by CCDS ID:73014.1Re-query CCDS DB by GeneID:440712See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73014.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000331555.10 ENSP00000356093.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000331555.10Link to Ensembl Protein Viewer:ENSP00000356093.1Re-query CCDS DB by Nucleotide ID:ENST00000331555Re-query CCDS DB by Protein ID:ENSP00000356093
Original member Current member EBI ENST00000582070.3 ENSP00000463990.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000582070.3Link to Ensembl Protein Viewer:ENSP00000463990.1Re-query CCDS DB by Nucleotide ID:ENST00000582070Re-query CCDS DB by Protein ID:ENSP00000463990
Original member Current member EBI ENST00000603488.5 ENSP00000474994.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000603488.5Link to Ensembl Protein Viewer:ENSP00000474994.1Re-query CCDS DB by Nucleotide ID:ENST00000603488Re-query CCDS DB by Protein ID:ENSP00000474994
Original member Current member NCBI NM_001007544.4 NP_001007545.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001007544.4Link to Protein Sequence:NP_001007545.1Re-query CCDS DB by Nucleotide ID:NM_001007544Re-query CCDS DB by Protein ID:NP_001007545Link to BLAST:NP_001007545.1
Original member Current member NCBI NM_001369490.1 NP_001356419.1 Accepted alive Link to Nucleotide Sequence:NM_001369490.1Link to Protein Sequence:NP_001356419.1Re-query CCDS DB by Nucleotide ID:NM_001369490Re-query CCDS DB by Protein ID:NP_001356419Link to BLAST:NP_001356419.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001007545.1 172 Q6ZWK4 172 100% 0 0
NP_001356419.1 172 Q6ZWK4 172 100% 0 0

Chromosomal Locations for CCDS 73014.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 206097829 206097839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 206098081 206098181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 206099655 206099798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 206101136 206101197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 206101752 206101952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (519 nt):
ATGCTGACAGAAGTCATGGAGGTCTGGCATGGCTTAGTGATCGCGGTGGTGTCCCTCTTCCTGCAGGCCT
GCTTCCTCACCGCCATCAACTACCTGCTCAGCAGGCACATGGCCCACAAGAGTGAACAGATACTGAAAGC
GGCCAGTCTCCAGGTTCCCAGGCCCAGCCCTGGCCACCATCATCCACCTGCTGTCAAAGAGATGAAGGAG
ACTCAGACAGAGAGAGACATCCCAATGTCTGATTCCCTTTACAGGCATGACAGCGACACACCCTCAGATA
GCTTGGATAGCTCCTGCAGTTCGCCTCCTGCCTGCCAGGCCACAGAGGATGTGGATTACACACAAGTCGT
CTTTTCTGACCCTGGAGAACTAAAAAATGACTCCCCGCTGGACTATGAGAACATAAAGGAAATCACAGAT
TATGTCAATGTCAATCCAGAAAGACACAAGCCCAGTTTCTGGTATTTTGTCAACCCTGCTCTGTCTGAGC
CAGCGGAATATGATCAAGTGGCCATGTGA

Translation (172 aa):
MLTEVMEVWHGLVIAVVSLFLQACFLTAINYLLSRHMAHKSEQILKAASLQVPRPSPGHHHPPAVKEMKE
TQTERDIPMSDSLYRHDSDTPSDSLDSSCSSPPACQATEDVDYTQVVFSDPGELKNDSPLDYENIKEITD
YVNVNPERHKPSFWYFVNPALSEPAEYDQVAM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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