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Report for CCDS41438.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41438.1 Public Homo sapiens 1 PAPPA2 24 110 108 CCDS HistoryNCBI Gene:60676Re-query CCDS DB by CCDS ID:41438.1Re-query CCDS DB by GeneID:60676See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41438.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000367662.5 ENSP00000356634.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000367662.5Link to Ensembl Protein Viewer:ENSP00000356634.3Re-query CCDS DB by Nucleotide ID:ENST00000367662Re-query CCDS DB by Protein ID:ENSP00000356634
Original member Current member NCBI NM_020318.3 NP_064714.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020318.3Link to Protein Sequence:NP_064714.2Re-query CCDS DB by Nucleotide ID:NM_020318Re-query CCDS DB by Protein ID:NP_064714Link to BLAST:NP_064714.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_064714.2 1791 Q9BXP8-1 1791 100% 0 0

Chromosomal Locations for CCDS 41438.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 176556323 176557241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176594524 176595595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176670970 176671115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176690137 176690430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176692126 176692318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176695738 176695859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176699100 176699589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176702607 176702735 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176706359 176706450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176709983 176710176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176711835 176711981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176739626 176739761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176739980 176740196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176765666 176765837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176769607 176769784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176770967 176771180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176789809 176789977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176791347 176791482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176793560 176793669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176800061 176800132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176840173 176840271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176842380 176842454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5376 nt):
ATGATGTGCTTAAAGATCCTAAGAATAAGCCTGGCGATTTTGGCTGGGTGGGCACTCTGTTCTGCCAACT
CTGAGCTGGGCTGGACACGCAAGAAATCCTTGGTTGAGAGGGAACACCTGAATCAGGTGCTGTTGGAAGG
AGAACGTTGTTGGCTGGGGGCCAAGGTTCGAAGACCCAGAGCTTCTCCACAGCATCACCTCTTTGGAGTC
TACCCCAGCAGGGCTGGGAACTACCTAAGGCCCTACCCCGTGGGGGAGCAAGAAATCCATCATACAGGAC
GCAGCAAACCAGACACTGAAGGAAATGCTGTGAGCCTTGTTCCCCCAGACCTGACTGAAAATCCAGCAGG
ACTGAGGGGTGCAGTTGAAGAGCCGGCTGCCCCATGGGTAGGGGATAGTCCTATTGGGCAATCTGAGCTG
CTGGGAGATGATGACGCTTATCTCGGCAATCAAAGATCCAAGGAGTCTCTAGGTGAGGCCGGGATTCAGA
AAGGCTCAGCCATGGCTGCCACTACTACCACCGCCATTTTCACAACCCTGAACGAACCCAAACCAGAGAC
CCAAAGGAGGGGCTGGGCCAAGTCCAGGCAGCGTCGCCAAGTGTGGAAGAGGCGGGCGGAAGATGGGCAG
GGAGACTCCGGTATCTCTTCACATTTCCAACCTTGGCCCAAGCATTCCCTTAAACACAGGGTCAAAAAGA
GTCCACCGGAGGAAAGCAACCAAAATGGTGGAGAGGGCTCCTACCGAGAAGCAGAGACCTTTAACTCCCA
AGTAGGACTGCCCATCTTATACTTCTCTGGGAGGCGGGAGCGGCTGCTGCTGCGTCCAGAAGTGCTGGCT
GAGATTCCCCGGGAGGCGTTCACAGTGGAAGCCTGGGTTAAACCGGAGGGAGGACAGAACAACCCAGCCA
TCATCGCAGGTGTGTTTGATAACTGCTCCCACACTGTCAGTGACAAAGGCTGGGCCCTGGGGATCCGCTC
AGGGAAGGACAAGGGAAAGCGGGATGCTCGCTTCTTCTTCTCCCTCTGCACCGACCGCGTGAAGAAAGCC
ACCATCTTGATTAGCCACAGTCGCTACCAACCAGGCACATGGACCCATGTGGCAGCCACTTACGATGGAC
GGCACATGGCCCTGTATGTGGATGGCACTCAGGTGGCTAGCAGTCTAGACCAGTCTGGTCCCCTGAACAG
CCCCTTCATGGCATCTTGCCGCTCTTTGCTCCTGGGGGGAGACAGCTCTGAGGATGGGCACTATTTCCGT
GGACACCTGGGCACACTGGTTTTCTGGTCGACCGCCCTGCCACAAAGCCATTTTCAGCACAGTTCTCAGC
ATTCAAGTGGGGAGGAGGAAGCGACTGACTTGGTCCTGACAGCGAGCTTTGAGCCTGTGAACACAGAGTG
GGTTCCCTTTAGAGATGAGAAGTACCCACGACTTGAGGTTCTCCAGGGCTTTGAGCCAGAGCCTGAGATT
CTGTCGCCTTTGCAGCCCCCACTCTGTGGGCAAACAGTCTGTGACAATGTGGAATTGATCTCCCAGTACA
ATGGATACTGGCCCCTTCGGGGAGAGAAGGTGATACGCTACCAGGTGGTGAACATCTGTGATGATGAGGG
CCTAAACCCCATTGTGAGTGAGGAGCAGATTCGTCTGCAGCACGAGGCACTGAATGAGGCCTTCAGCCGC
TACAACATCAGCTGGCAGCTGAGCGTCCACCAGGTCCACAATTCCACCCTGCGACACCGGGTTGTGCTTG
TGAACTGTGAGCCCAGCAAGATTGGCAATGACCATTGTGACCCCGAGTGTGAGCACCCACTCACAGGCTA
TGATGGGGGTGACTGCCGCCTGCAGGGCCGCTGCTACTCCTGGAACCGCAGGGATGGGCTCTGTCACGTG
GAGTGTAACAACATGCTGAACGACTTTGACGACGGAGACTGCTGCGACCCCCAGGTGGCTGATGTGCGCA
AGACCTGCTTTGACCCTGACTCACCCAAGAGGGCATACATGAGTGTGAAGGAGCTGAAGGAGGCCCTGCA
GCTGAACAGTACTCACTTCCTCAACATCTACTTTGCCAGCTCAGTGCGGGAAGACCTTGCAGGTGCTGCC
ACCTGGCCTTGGGACAAGGACGCTGTCACTCACCTGGGTGGCATTGTCCTCAGCCCAGCATATTATGGGA
TGCCTGGCCACACCGACACCATGATCCATGAAGTGGGACATGTTCTGGGACTCTACCATGTCTTTAAAGG
AGTCAGTGAAAGAGAATCCTGCAATGACCCCTGCAAGGAGACAGTGCCATCCATGGAAACGGGAGACCTC
TGTGCCGACACCGCCCCCACTCCCAAGAGTGAGCTGTGCCGGGAACCAGAGCCCACTAGTGACACCTGTG
GCTTCACTCGCTTCCCAGGGGCTCCGTTCACCAACTACATGAGCTACACGGATGATAACTGCACTGACAA
CTTCACTCCTAACCAAGTGGCCCGAATGCATTGCTATTTGGACCTAGTCTATCAGCAGTGGACTGAAAGC
AGAAAGCCCACCCCCATCCCCATTCCACCTATGGTCATCGGACAGACCAACAAGTCCCTCACTATCCACT
GGCTGCCTCCTATTAGTGGAGTTGTATATGACAGGGCCTCAGGCAGCTTGTGTGGCGCTTGCACTGAAGA
TGGGACCTTTCGTCAGTATGTGCACACAGCTTCCTCCCGGCGGGTGTGTGACTCCTCAGGTTATTGGACC
CCAGAGGAGGCTGTGGGGCCTCCTGATGTGGATCAGCCCTGCGAGCCAAGCTTACAGGCCTGGAGCCCTG
AGGTCCACCTGTACCACATGAACATGACGGTCCCCTGCCCCACAGAAGGCTGTAGCTTGGAGCTGCTCTT
CCAACACCCGGTCCAAGCCGACACCCTCACCCTGTGGGTCACTTCCTTCTTCATGGAGTCCTCGCAGGTC
CTCTTTGACACAGAGATCTTGCTGGAAAACAAGGAGTCAGTGCACCTGGGCCCCTTAGACACTTTCTGTG
ACATCCCACTCACCATCAAACTGCACGTGGATGGGAAGGTGTCGGGGGTGAAAGTCTACACCTTTGATGA
GAGGATAGAGATTGATGCAGCACTCCTGACTTCTCAGCCCCACAGTCCCTTGTGCTCTGGCTGCAGGCCT
GTGAGGTACCAGGTTCTCCGCGATCCCCCATTTGCCAGTGGTTTGCCCGTGGTGGTGACACATTCTCACA
GGAAGTTCACGGACGTGGAGGTCACACCTGGACAGATGTATCAGTACCAAGTTCTAGCTGAAGCTGGAGG
AGAACTGGGAGAAGCTTCGCCTCCTCTGAACCACATTCATGGAGCTCCTTATTGTGGAGATGGGAAGGTG
TCAGAGAGACTGGGAGAAGAGTGTGATGATGGAGACCTTGTGAGCGGAGATGGCTGCTCCAAGGTGTGTG
AGCTGGAGGAAGGTTTCAACTGTGTAGGAGAGCCAAGCCTTTGCTACATGTATGAGGGAGATGGCATATG
TGAACCTTTTGAGAGAAAAACCAGCATTGTAGACTGTGGCATCTACACTCCCAAAGGATACTTGGATCAA
TGGGCTACCCGGGCTTACTCCTCTCATGAAGACAAGAAGAAGTGTCCTGTTTCCTTGGTAACTGGAGAAC
CTCATTCCCTAATTTGCACATCATACCATCCAGATTTACCCAACCACCGTCCCCTAACTGGCTGGTTTCC
CTGTGTTGCCAGTGAAAATGAAACTCAGGATGACAGGAGTGAACAGCCAGAAGGTAGCCTGAAGAAAGAG
GATGAGGTTTGGCTCAAAGTGTGTTTCAATAGACCAGGAGAGGCCAGAGCAATTTTTATTTTTTTGACAA
CTGATGGCCTAGTTCCCGGAGAGCATCAGCAGCCGACAGTGACTCTCTACCTGACCGATGTCCGTGGAAG
CAACCACTCTCTTGGAACCTATGGACTGTCATGCCAGCATAATCCACTGATTATCAATGTGACCCATCAC
CAGAATGTCCTTTTCCACCATACCACCTCAGTGCTGCTGAATTTCTCATCCCCACGGGTCGGCATCTCAG
CTGTGGCTCTAAGGACATCCTCCCGCATTGGTCTTTCGGCTCCCAGTAACTGCATCTCAGAGGACGAGGG
GCAGAATCATCAGGGACAGAGCTGTATCCATCGGCCCTGTGGGAAGCAGGACAGCTGTCCGTCATTGCTG
CTTGATCATGCTGATGTGGTGAACTGTACCTCTATAGGCCCAGGTCTCATGAAGTGTGCTATCACTTGTC
AAAGGGGATTTGCCCTTCAGGCCAGCAGTGGGCAGTACATCAGGCCCATGCAGAAGGAAATTCTGCTCAC
ATGTTCTTCTGGGCACTGGGACCAGAATGTGAGCTGCCTTCCCGTGGACTGCGGTGTTCCCGACCCGTCT
TTGGTGAACTATGCAAACTTCTCCTGCTCAGAGGGAACCAAATTTCTGAAACGCTGCTCAATCTCTTGTG
TCCCACCAGCCAAGCTGCAAGGACTGAGCCCATGGCTGACATGTCTTGAAGATGGTCTCTGGTCTCTCCC
TGAAGTCTACTGCAAGTTGGAGTGTGATGCTCCCCCTATTATTCTGAATGCCAACTTGCTCCTGCCTCAC
TGCCTCCAGGACAACCACGACGTGGGCACCATCTGCAAATATGAATGCAAACCAGGGTACTATGTGGCAG
AAAGTGCAGAGGGTAAAGTCAGGAACAAGCTCCTGAAGATACAATGCCTGGAAGGTGGAATCTGGGAGCA
AGGCAGCTGCATTCCTGTGGTGTGTGAGCCACCCCCTCCTGTGTTTGAAGGCATGTATGAATGTACCAAT
GGCTTCAGCCTGGACAGCCAGTGTGTGCTCAACTGTAACCAGGAACGTGAAAAGCTTCCCATCCTCTGCA
CTAAAGAGGGCCTGTGGACCCAGGAGTTTAAGTTGTGTGAGAATCTGCAAGGAGAATGCCCACCACCCCC
CTCAGAGCTGAATTCTGTGGAGTACAAATGTGAACAAGGATATGGGATTGGTGCAGTGTGTTCCCCATTG
TGTGTAATCCCCCCCAGTGACCCCGTGATGCTACCTGAGAATATCACTGCTGACACTCTGGAGCACTGGA
TGGAACCTGTCAAAGTCCAGAGCATTGTGTGCACTGGCCGGCGTCAATGGCACCCAGACCCCGTCTTAGT
CCACTGCATCCAGTCATGTGAGCCCTTCCAAGCAGATGGTTGGTGTGACACTATCAACAACCGAGCCTAC
TGCCACTATGACGGGGGAGACTGCTGCTCTTCCACACTCTCCTCCAAGAAGGTCATTCCATTTGCTGCTG
ACTGTGACCTGGATGAGTGCACCTGCCGGGACCCCAAGGCAGAAGAAAATCAGTAA

Translation (1791 aa):
MMCLKILRISLAILAGWALCSANSELGWTRKKSLVEREHLNQVLLEGERCWLGAKVRRPRASPQHHLFGV
YPSRAGNYLRPYPVGEQEIHHTGRSKPDTEGNAVSLVPPDLTENPAGLRGAVEEPAAPWVGDSPIGQSEL
LGDDDAYLGNQRSKESLGEAGIQKGSAMAATTTTAIFTTLNEPKPETQRRGWAKSRQRRQVWKRRAEDGQ
GDSGISSHFQPWPKHSLKHRVKKSPPEESNQNGGEGSYREAETFNSQVGLPILYFSGRRERLLLRPEVLA
EIPREAFTVEAWVKPEGGQNNPAIIAGVFDNCSHTVSDKGWALGIRSGKDKGKRDARFFFSLCTDRVKKA
TILISHSRYQPGTWTHVAATYDGRHMALYVDGTQVASSLDQSGPLNSPFMASCRSLLLGGDSSEDGHYFR
GHLGTLVFWSTALPQSHFQHSSQHSSGEEEATDLVLTASFEPVNTEWVPFRDEKYPRLEVLQGFEPEPEI
LSPLQPPLCGQTVCDNVELISQYNGYWPLRGEKVIRYQVVNICDDEGLNPIVSEEQIRLQHEALNEAFSR
YNISWQLSVHQVHNSTLRHRVVLVNCEPSKIGNDHCDPECEHPLTGYDGGDCRLQGRCYSWNRRDGLCHV
ECNNMLNDFDDGDCCDPQVADVRKTCFDPDSPKRAYMSVKELKEALQLNSTHFLNIYFASSVREDLAGAA
TWPWDKDAVTHLGGIVLSPAYYGMPGHTDTMIHEVGHVLGLYHVFKGVSERESCNDPCKETVPSMETGDL
CADTAPTPKSELCREPEPTSDTCGFTRFPGAPFTNYMSYTDDNCTDNFTPNQVARMHCYLDLVYQQWTES
RKPTPIPIPPMVIGQTNKSLTIHWLPPISGVVYDRASGSLCGACTEDGTFRQYVHTASSRRVCDSSGYWT
PEEAVGPPDVDQPCEPSLQAWSPEVHLYHMNMTVPCPTEGCSLELLFQHPVQADTLTLWVTSFFMESSQV
LFDTEILLENKESVHLGPLDTFCDIPLTIKLHVDGKVSGVKVYTFDERIEIDAALLTSQPHSPLCSGCRP
VRYQVLRDPPFASGLPVVVTHSHRKFTDVEVTPGQMYQYQVLAEAGGELGEASPPLNHIHGAPYCGDGKV
SERLGEECDDGDLVSGDGCSKVCELEEGFNCVGEPSLCYMYEGDGICEPFERKTSIVDCGIYTPKGYLDQ
WATRAYSSHEDKKKCPVSLVTGEPHSLICTSYHPDLPNHRPLTGWFPCVASENETQDDRSEQPEGSLKKE
DEVWLKVCFNRPGEARAIFIFLTTDGLVPGEHQQPTVTLYLTDVRGSNHSLGTYGLSCQHNPLIINVTHH
QNVLFHHTTSVLLNFSSPRVGISAVALRTSSRIGLSAPSNCISEDEGQNHQGQSCIHRPCGKQDSCPSLL
LDHADVVNCTSIGPGLMKCAITCQRGFALQASSGQYIRPMQKEILLTCSSGHWDQNVSCLPVDCGVPDPS
LVNYANFSCSEGTKFLKRCSISCVPPAKLQGLSPWLTCLEDGLWSLPEVYCKLECDAPPIILNANLLLPH
CLQDNHDVGTICKYECKPGYYVAESAEGKVRNKLLKIQCLEGGIWEQGSCIPVVCEPPPPVFEGMYECTN
GFSLDSQCVLNCNQEREKLPILCTKEGLWTQEFKLCENLQGECPPPPSELNSVEYKCEQGYGIGAVCSPL
CVIPPSDPVMLPENITADTLEHWMEPVKVQSIVCTGRRQWHPDPVLVHCIQSCEPFQADGWCDTINNRAY
CHYDGGDCCSSTLSSKKVIPFAADCDLDECTCRDPKAEENQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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