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Report for CCDS1309.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1309.1 Public Homo sapiens 1 ANKRD45 24 110 108 CCDS HistoryNCBI Gene:339416Re-query CCDS DB by CCDS ID:1309.1Re-query CCDS DB by GeneID:339416See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1309.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000333279.3 ENSP00000331268.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000333279.3Link to Ensembl Protein Viewer:ENSP00000331268.2Re-query CCDS DB by Nucleotide ID:ENST00000333279Re-query CCDS DB by Protein ID:ENSP00000331268
Original member Current member EBI ENST00000648193.1 ENSP00000498204.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000648193.1Link to Ensembl Protein Viewer:ENSP00000498204.1Re-query CCDS DB by Nucleotide ID:ENST00000648193Re-query CCDS DB by Protein ID:ENSP00000498204
Original member Current member NCBI NM_198493.3 NP_940895.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_198493.3Link to Protein Sequence:NP_940895.1Re-query CCDS DB by Nucleotide ID:NM_198493Re-query CCDS DB by Protein ID:NP_940895Link to BLAST:NP_940895.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_940895.1 266 Q5TZF3-2 266 100% 0 0

Chromosomal Locations for CCDS 1309.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 173610145 173610215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 173624787 173624925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 173627065 173627159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 173646846 173647013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 173659091 173659418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (801 nt):
ATGGAGTCAGAAGGACCTCCAGAGTCAGAGAGTTCAGAATTTTTCTCACAGCAAGAAGAGGAAAATGAAG
AAGAAGAAGCCCAAGAACCAGAGGAAACAGGCCCTAAGAACCCCCTTTTACAACCTGCTCTCACAGGGGA
TGTAGAGGGTTTGCAGAAGATATTTGAGGATCCTGAGAATCCTCATCATGAACAGGCCATGCAGCTTCTC
TTAGAAGAAGACATCGTTGGGAGAAATTTGTTGTATGCAGCTTGCATGGCTGGGCAAAGTGACGTGATTA
GAGCTTTGGCAAAATATGGTGTGAATCTGAATGAAAAAACCACCAGAGGGTACACACTCTTACATTGTGC
TGCAGCCTGGGGTCGTTTGGAAACTTTGAAAGCACTGGTAGAACTGGATGTTGATATAGAAGCTTTGAAC
TTCCGGGAAGAAAGGGCTCGAGATGTTGCTGCTAGATATTCTCAGACTGAGTGTGTTGAATTCCTGGACT
GGGCAGATGCAAGGCTGACTCTGAAAAAATATATTGCAAAAGTCTCTTTAGCTGTTACTGACACAGAAAA
GGGATCAGGGAAACTCCTTAAGGAAGACAAGAATACCATCCTCAGTGCATGCCGTGCAAAAAATGAGTGG
TTGGAAACCCATACAGAAGCTTCCATTAATGAGCTTTTTGAGCAGAGACAACAACTGGAAGATATTGTGA
CTCCTATCTTCACAAAAATGACTACACCATGTCAAGTGAAAAGTGCCAAATCTGTAACAAGCCATGACCA
GAAGAGAAGTCAAGATGATACCTCCAACTGA

Translation (266 aa):
MESEGPPESESSEFFSQQEEENEEEEAQEPEETGPKNPLLQPALTGDVEGLQKIFEDPENPHHEQAMQLL
LEEDIVGRNLLYAACMAGQSDVIRALAKYGVNLNEKTTRGYTLLHCAAAWGRLETLKALVELDVDIEALN
FREERARDVAARYSQTECVEFLDWADARLTLKKYIAKVSLAVTDTEKGSGKLLKEDKNTILSACRAKNEW
LETHTEASINELFEQRQQLEDIVTPIFTKMTTPCQVKSAKSVTSHDQKRSQDDTSN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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