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Report for CCDS21916.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21916.1 Public Mus musculus 7 Acadsb 23 108 98 CCDS HistoryNCBI Gene:66885Re-query CCDS DB by CCDS ID:21916.1Re-query CCDS DB by GeneID:66885See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21916.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000015829.14 ENSMUSP00000015829.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000015829.14Link to Ensembl Protein Viewer:ENSMUSP00000015829.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000015829Re-query CCDS DB by Protein ID:ENSMUSP00000015829
Original member Current member NCBI NM_025826.4 NP_080102.1 Accepted alive Link to Nucleotide Sequence:NM_025826.4Link to Protein Sequence:NP_080102.1Re-query CCDS DB by Nucleotide ID:NM_025826Re-query CCDS DB by Protein ID:NP_080102Link to BLAST:NP_080102.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080102.1 432 Q9DBL1 432 100% 0 0

Chromosomal Locations for CCDS 21916.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 131410746 131410787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 131424472 131424631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 131425775 131425875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 131428429 131428635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 131429947 131430117 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 131431937 131432062 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 131434270 131434362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 131437402 131437491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 131441202 131441339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 131443469 131443568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 131444237 131444307 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1299 nt):
ATGGCGGTCTCTGCGCTCCAGCTGTGGCGTATGGGCGGGCTGCTGAGAAGACGCTTCCCAACCTGCTTGT
CTCCTTGGAAGATTCCTCCTCGTGTCCTCAAATCCTCACAACCGGAAGCTCTAGTCAGTCTGACAAACAA
TGCAGTAGCCTTTGCACCTCTGCAGACACTTACTGATGAGGAAATTATGATGAAGCAGACAGTCAAAAAA
TTTGCACAGGAGCACGTTGCTCCTCTGGTTTCCTCTATGGATGAGAACTCAAAAATGGAGAAATCGGTGA
TCCAGGGATTGTTCCAGCAAGGGCTGATGGGCATTGAAGTTGAAGCACAATATGGAGGGACAGAAGCTTC
CTTTTTCTGCTCTGTCCTAGTGATAGAGGAACTAGCTAAGGTGGATGCTTCGGTGGCTCTCCTGTGTGAC
ATCCAGAACACAATAATTAACAACCTGTTTAGAAAACACGCTTCAGAAGAACAGAAGGCCACCTATTTGC
CAAAGCTGGTTACAGAAAAATTAGGGAGCTTTTGCCTCTCTGAAGCTGGAGCCGGTAGCGACTCTTTCGC
TATGAAAACAAGAGCTGATAAAAGTGGAAATTACTACGTCCTCAATGGGTCGAAGATGTGGATCAGCCAT
GCCGAGCATGCAGAGCTCTTCCTGGTCTTCGCCAATGTGGACCCCAGCTCTGGCTACAGAGGCATCACCT
GCTTCTTAGTAGACCGAGATACAGAAGGTTTCCAGATAGGGAAACGAGAAAATAAAATGGGCATCAGAGC
TTCATCCACCTGTCAGTTAACATTTGAAAATGTTAAGGTTCCAGAGACTAATATTTTGGGGAAAATTGGG
CATGGTTATAAGTATGCCATAGGAAGTCTTAATGAAGGTAGAATCGGAATTGCTGCACAGATGCTAGGAC
TGGCCCAAGGATGTTTTGACTACACTATTCCATACATTAAAGAAAGGATGCAGTTTGGCAAACGAATATT
TGATTTTCAGGGGCTCCAACACCAAGTGGCTCAGGTGGCCACCCAGCTGGAAGCCACACGGTTGCTAACA
TACAACGCTGCTAGGCTCGTAGAAGCCGGAAGGCCATTTATAAAAGAAGCATCTATGGCCAAATATTATG
CATCTGAGGTCGCTGGGCTAACAACAAGCAAGTGCATCGAGTGGATGGGAGGGGTCGGCTACACCAAAGA
TTACCCTGTGGAGAAATTCTTCCGAGATGCCAAGATCGGTACAATATATGAAGGAGCTTCCAACATCCAG
CTGAACACCATCGCCAAGCACATCGATGCAGAGTACTGA

Translation (432 aa):
MAVSALQLWRMGGLLRRRFPTCLSPWKIPPRVLKSSQPEALVSLTNNAVAFAPLQTLTDEEIMMKQTVKK
FAQEHVAPLVSSMDENSKMEKSVIQGLFQQGLMGIEVEAQYGGTEASFFCSVLVIEELAKVDASVALLCD
IQNTIINNLFRKHASEEQKATYLPKLVTEKLGSFCLSEAGAGSDSFAMKTRADKSGNYYVLNGSKMWISH
AEHAELFLVFANVDPSSGYRGITCFLVDRDTEGFQIGKRENKMGIRASSTCQLTFENVKVPETNILGKIG
HGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERMQFGKRIFDFQGLQHQVAQVATQLEATRLLT
YNAARLVEAGRPFIKEASMAKYYASEVAGLTTSKCIEWMGGVGYTKDYPVEKFFRDAKIGTIYEGASNIQ
LNTIAKHIDAEY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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