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Report for CCDS21070.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21070.1 Public Mus musculus 7 Ppp1r14a 23 108 98 CCDS HistoryNCBI Gene:68458Re-query CCDS DB by CCDS ID:21070.1Re-query CCDS DB by GeneID:68458See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21070.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000048187.5 ENSMUSP00000035642.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000048187.5Link to Ensembl Protein Viewer:ENSMUSP00000035642.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000048187Re-query CCDS DB by Protein ID:ENSMUSP00000035642
Original member NCBI NM_026731.3 NP_081007.2 Updated not alive Link to Nucleotide Sequence:NM_026731.3Link to Protein Sequence:NP_081007.2Re-query CCDS DB by Nucleotide ID:NM_026731Re-query CCDS DB by Protein ID:NP_081007
Current member NCBI NM_026731.4 NP_081007.2 Accepted alive Link to Nucleotide Sequence:NM_026731.4Link to Protein Sequence:NP_081007.2Re-query CCDS DB by Nucleotide ID:NM_026731Re-query CCDS DB by Protein ID:NP_081007Link to BLAST:NP_081007.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_081007.2 147 Q91VC7 147 100% 0 0

Chromosomal Locations for CCDS 21070.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 29289335 29289535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 29291510 29291590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 29292051 29292083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 29293190 29293318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (444 nt):
ATGGCTGCGCAGCGGCTGGGCAAGCGCGTGCTGAGCAAGCTGCAGTCCCCGTCGCGGGCCCGCGGCCCGG
GGGGCAGCCCCAGCGGGCTGCAGAAGCGGCACGCGCGAGTCACGGTCAAGTACGACCGACGGGAGCTGCA
GCGACGGCTGGACGTGGAGAAGTGGATCGACGGATGCTTGGAGGAGCTGTACCGCGGCAGGGAGTCAGAC
ATGCCGGACGAGGTCAACATCGATGAGCTATTGGAATTGGACAGTGAAGAGGAAAGATGCCGGAAAATCC
AGGGACTTCTGGAGGCTTGTGCAAATCCCACAGAGGACTTCGTCCAGGAGCTACTGGCCAAGCTTCGGGG
CCTGCACAAACAGCCGGGCTTCCCGCAGCCCAGCCCCTCAGATGACCCCAGCCTGAGCCCCCGCCAGGAC
CGGGCCCACACTGCCCCACCCTGA

Translation (147 aa):
MAAQRLGKRVLSKLQSPSRARGPGGSPSGLQKRHARVTVKYDRRELQRRLDVEKWIDGCLEELYRGRESD
MPDEVNIDELLELDSEEERCRKIQGLLEACANPTEDFVQELLAKLRGLHKQPGFPQPSPSDDPSLSPRQD
RAHTAPP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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