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Report for CCDS19841.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
19841.1 Public Mus musculus 5 Grid2ip 23 108 98 CCDS HistoryNCBI Gene:170935Re-query CCDS DB by CCDS ID:19841.1Re-query CCDS DB by GeneID:170935See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 19841.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000010969.14 ENSMUSP00000010969.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000010969.14Link to Ensembl Protein Viewer:ENSMUSP00000010969.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000010969Re-query CCDS DB by Protein ID:ENSMUSP00000010969
Original member Current member NCBI NM_133355.2 NP_579933.1 Accepted alive Link to Nucleotide Sequence:NM_133355.2Link to Protein Sequence:NP_579933.1Re-query CCDS DB by Nucleotide ID:NM_133355Re-query CCDS DB by Protein ID:NP_579933Link to BLAST:NP_579933.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_579933.1 1024 Q0QWG9-2 1024 100% 0 0

Chromosomal Locations for CCDS 19841.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 143363962 143363975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143372994 143373242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143373431 143373516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143374400 143374469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143375252 143375346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143375550 143375733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143377489 143377643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143379252 143379392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143380100 143380197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143380386 143380503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143381583 143381938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143382514 143382930 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143386007 143386094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143386721 143386798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143387318 143387514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143387822 143387977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143388109 143388195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143388649 143388778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143388867 143388985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143391041 143391205 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143391397 143391468 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3075 nt):
ATGAGCTGCCTAGGGATCTTTATTCCCAAAAAGCATCGGGCGCGCTTCGACGAGGTGGTGTCGCAGGGTC
TGCTGGGCAAGCTGTGCCGTGCTCGGAGGGCGCAGGGCGCACAGCGTTTGCGTCGGAGCCGCAGCGAGGA
GCGCCCGGAGCGCCTCTTAGTGTCCACGCGCGCTAGCGCCGCTCCCCGCCGTCCGGATGAGCCACCCCCG
CGGAAGGCAACCTCGCTGCTGGGCGGTCGCACTGGCCCTGGGGGTCCTCGTAGGACGGTTCGAGTTTATA
AAGGCAACAAGAGTTTCGGCTTCACTCTGCGAGGCCATGGACCGGTCTGGATCGAATCTGTCCTGCCTGG
CAGCCCGGCTGAAAATGCCTCCCTCAAGTCAGGTGACCGGATCCTCTTCCTCAATGGATTGGACATGAGG
AACTGCTCCCACGACAAGGTGGTGTCCATGTTGCAGGGCAGTGGCGCCATGCCCACGCTGGTGGTAGAGG
AAGGACCGGTCCCTTTCGCCAGTGATTCAGATTCTCTGGATTCCCCGACCCGGGCGTCAGCTCTCACCTC
GCTGCAGTGGGTGGCGGATATCCTGCCTTCCAGTATCCGAGTCCAGGGGAGGACCTTCAGCCAGCAGCTG
GACCACCTCCTCACTCCTCCCGAGCGCTATGGAGTCTGCCGAGCTCTCGAGCGCTTCTTTCAGCACAGGA
ACATCGATACCCTCATCGTGGATGTCTACCCCGTCCTGGACACACCCGCCAAGCAGGTACTCTGGCAGTT
CCTCTACCAGCTGCTGACCTACGAGGAGCAGGAGCTGTGTCAGGAGAAGATCGCGTGCTTCCTCGGCTAC
ACAGCCATGACGGAACCTGAATCCTCACTGGACCTCGAGCCAGAGTCTACACCAGAGCCCACACCAGAGC
CACAACCACGGAGTTCCCTGAGGGCCTCTTCCATGTGCCGTCGCAGCTTGCGCTCCCAGGGCCTGGAGAC
CAGCCTCAGCTGTGGTCCTGGTGACTGCCCTGAGATGCCCCTACCTCTGATCCCAGGCGAGCGTCAGGCT
GGCGATGGCACATCCCTCCCGGAAACCCCTAACCCCAAAATGATGTCAGCGGTCTATGCAGAGCTCGAGT
CTCGACTGAACAGCAGCTTCAAAGGGAAGATAGGGACCATGTCCAAATCCCGGGCCTCTCCACCAGTCCC
CAGCCTGGTCGGCACATCAGGGCCCAGGACCCTGTCTGGAGTCTCCTGGCCCAGTGACCGGCTCCTGCCT
TCCCCGTGCTATGACCCGCTGTGTTCTGGGGGTCTGGCCTCTCCCAGCAGCTCGGAATCCCACCCCTACG
CCAGCTTGGACAGCAGCAGGGCGCCCTCCCCACAGCCAGGCCTTGGATCCATCCACGCCGACAGCCCCCC
AAGCCCAGACCCCATCCGGCCGCCCAGTCGCCGGAAGCTCTTCGCCTTCTCACGCCCAGTCCGGAGCCGA
GACACAGATCGCTTCCTGGATGCGCTGAGCGAGCAGCTGGGTCCCCGCCTCAGCATCGTGGATGACTTCC
TGACACCCGAGAATGACTATGAAGAGATGAGCTTCCATGATGACCAGGGCAGCTTTGTGACCAACGAGAG
GAGCAGCGCTAGCGAGTGTGTCAGCAGCAGCGAGGAGGGCAGTTCTCTGACCTACTCCTCCATCTCCGAC
CACATCCCCCCACCTCCACTCAGCCCCCCGCCGCCACCGCCCCTGCCTTTCCATGACCCCAAGCCTAGCT
CCCGCACCTCCGATGGTCCCCGAGGTCCCCCTCAGTCATTGACCAAACCCCTCACCCAGATCAACCATCC
AGTCCCACCCCCACCCCCACCCCCTCTACCCCCACCTGTGCCCTGTGCACCCCCCATGCTATCCCGAGGC
GTGGGCCACCGCCGCAGTGAGACCAGCCATATGAGCGTCAAGCGCTTACGCTGGGAACAGGTGGAGAACT
CAGAAGGCACCATCTGGGGTCAGCTTGGGGAAGACTCTGACTATGACAAGCTGAGTGACATGGTGAAATA
CCTCGACCTGGAGCTCCACTTCGGCACCCAGAAACCTCCGAAGCCAGTGCCCGGCCCGGAGCCCTTCAGG
AAGAAGGAAGTGGTGGAGATCTTGTCCCACAAGAAGGCCTACAATACCTCCATTCTCCTAGCGCACCTGA
AGCTGACCCCTGGCGAGCTGCGGCAAGTGCTCATGAGCATGGAACCCCGGCGCCTGGAGCCTGCTCATCT
GGCGCAGCTGCTGCTCTTCGCTCCTGACGCCGACGAGGAACAGCGATATCAGGCTTTCCGCGAGGCTCCG
GGTCGCCTCAGTGAGCCGGACCAGTTCGTCCTGCAGATGCTGTCGGTTCCCGAATACAAGACCCGCCTGC
GCAGTCTACACTTCCAGGCTACCTTGCAGGAGAAGACAGAGGAGATACGAGGCAGCCTCGAGTGTCTGCG
ACAGGCATCTCTGGAGCTCAAAAACAGCCGGAAACTCGCCAAGATCCTGGAGTTTGTGTTGGCCATGGGT
AACTATCTCAACGATGGACAGCCCAAGACCAACAAGACCACTGGCTTCAAGATCAACTTCCTGACCGAGC
TAAACTCCACCAAGACAGTGGACGGGAAGTCCACCTTTCTGCACATCCTTGCCAAATCGCTAAGCCAGCA
CTTCCCTGAGCTCCTGGGCTTTGCCCAGGACCTGCCCACTGTGCCCCTGGCTGCCAAAGTGAACCAGCGA
GCCCTGACTGGTGACCTGGCTGACCTCCATGACACCGTCAGTGAGATTCAGGTGGCCTGCCAGAGCATGG
CCCCTTCCAGTGAGGACAGGTTTGCTGTGGTCATGGCTTCCTTTCTGGAAACAGCGCAGCCAGCCCTGCG
AGCGTTGGATGGTCTGCAGCGAGAGGCCATGGAGGAGCTAGGGAAGGCTCTGGCCTTCTTCGGAGAGGAC
TCCAAGGCCACTACCTCAGAGGCCTTCTTTGGCATCTTTTCAGAATTCATGAGCAAATTTGAGAGAGCCC
TCAGCGACCTGCAGGCAGGGGATGGCCCACGCAGCTCAGGGATGGTGTCACCCCTGGCCTGGTGA

Translation (1024 aa):
MSCLGIFIPKKHRARFDEVVSQGLLGKLCRARRAQGAQRLRRSRSEERPERLLVSTRASAAPRRPDEPPP
RKATSLLGGRTGPGGPRRTVRVYKGNKSFGFTLRGHGPVWIESVLPGSPAENASLKSGDRILFLNGLDMR
NCSHDKVVSMLQGSGAMPTLVVEEGPVPFASDSDSLDSPTRASALTSLQWVADILPSSIRVQGRTFSQQL
DHLLTPPERYGVCRALERFFQHRNIDTLIVDVYPVLDTPAKQVLWQFLYQLLTYEEQELCQEKIACFLGY
TAMTEPESSLDLEPESTPEPTPEPQPRSSLRASSMCRRSLRSQGLETSLSCGPGDCPEMPLPLIPGERQA
GDGTSLPETPNPKMMSAVYAELESRLNSSFKGKIGTMSKSRASPPVPSLVGTSGPRTLSGVSWPSDRLLP
SPCYDPLCSGGLASPSSSESHPYASLDSSRAPSPQPGLGSIHADSPPSPDPIRPPSRRKLFAFSRPVRSR
DTDRFLDALSEQLGPRLSIVDDFLTPENDYEEMSFHDDQGSFVTNERSSASECVSSSEEGSSLTYSSISD
HIPPPPLSPPPPPPLPFHDPKPSSRTSDGPRGPPQSLTKPLTQINHPVPPPPPPPLPPPVPCAPPMLSRG
VGHRRSETSHMSVKRLRWEQVENSEGTIWGQLGEDSDYDKLSDMVKYLDLELHFGTQKPPKPVPGPEPFR
KKEVVEILSHKKAYNTSILLAHLKLTPGELRQVLMSMEPRRLEPAHLAQLLLFAPDADEEQRYQAFREAP
GRLSEPDQFVLQMLSVPEYKTRLRSLHFQATLQEKTEEIRGSLECLRQASLELKNSRKLAKILEFVLAMG
NYLNDGQPKTNKTTGFKINFLTELNSTKTVDGKSTFLHILAKSLSQHFPELLGFAQDLPTVPLAAKVNQR
ALTGDLADLHDTVSEIQVACQSMAPSSEDRFAVVMASFLETAQPALRALDGLQREAMEELGKALAFFGED
SKATTSEAFFGIFSEFMSKFERALSDLQAGDGPRSSGMVSPLAW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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