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Report for CCDS71111.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
71111.1 Public Mus musculus 2 Muc15 23 108 98 CCDS HistoryNCBI Gene:269328Re-query CCDS DB by CCDS ID:71111.1Re-query CCDS DB by GeneID:269328See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 71111.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000111017.8 ENSMUSP00000106646.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000111017.8Link to Ensembl Protein Viewer:ENSMUSP00000106646.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000111017Re-query CCDS DB by Protein ID:ENSMUSP00000106646
Original member Current member NCBI NM_001290786.1 NP_001277715.1 Accepted alive Link to Nucleotide Sequence:NM_001290786.1Link to Protein Sequence:NP_001277715.1Re-query CCDS DB by Nucleotide ID:NM_001290786Re-query CCDS DB by Protein ID:NP_001277715Link to BLAST:NP_001277715.1

Chromosomal Locations for CCDS 71111.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 110731221 110731905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 110733806 110733955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 110737402 110737421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (855 nt):
ATGTTGACCTTAGCCAAAATTGCATTGATTTCAAGTCTGTTCATTTCATTACCATTTGCGAGGCCTCAGA
AACAAAATCCACGAAGAAATGTAACTCAGCACACTATAGAAGATGTGAAAATAATGAGAAACAACTCCAT
TCATTTGGAAAGAAGCATAAATGTAACTTCAGAGAATGGAAGTGATATCTCCAATCTCATGGTGACAACT
CCTTCTCCTTTGAATTTATCTACAACCTTCAGAACAACAAATTCCACCAGAACCTGGCTAATGACTAGCT
CATCTGAGAGTTCCAGACCCTCCTCCACATATTCTGTTCCTCCCTTGGTTCAGGGCTTTGTTTCCAAGTT
GCCTTTGAACTCATCCACAGCAGACGCAAATCCTTTACAGGTCTCCGAACATTCCAATTCTACAAATTCC
CCATCACCAGAAAACTTTACTTGGTCTTTGGACAATGACACAATGAACAGTCCTGAAGATATTTCCACTA
CAGTAAGACCCTTCCCTCCACCTCCAAAGACCACACCTGTGACCCCTTTCACAGCTGAACCTACTGAATG
GCTCCCCACAAACAATGACAACTTTGCTGGTTTTACCCCGTATCAAGAAAAAACAACTTTACAACCTACA
CTAAAATTCACCAATAATTCAAAACTTTTCCCAAATACATCAGACACCCCAAAAGAGAATAAGAACACAG
GAATAGTATTTGGAGCCATTTTAGGAGCCATCCTGGGTGCTTCACTGCTTAGCCTTGTTGGCTACTTATT
GTGTGGACAACGGAAAACAGATTCATTTTCCCATCGGCGCCTTTATGATGACAGAAACGAACCAGTTACT
ACAACCCAGCTGTGA

Translation (284 aa):
MLTLAKIALISSLFISLPFARPQKQNPRRNVTQHTIEDVKIMRNNSIHLERSINVTSENGSDISNLMVTT
PSPLNLSTTFRTTNSTRTWLMTSSSESSRPSSTYSVPPLVQGFVSKLPLNSSTADANPLQVSEHSNSTNS
PSPENFTWSLDNDTMNSPEDISTTVRPFPPPPKTTPVTPFTAEPTEWLPTNNDNFAGFTPYQEKTTLQPT
LKFTNNSKLFPNTSDTPKENKNTGIVFGAILGAILGASLLSLVGYLLCGQRKTDSFSHRRLYDDRNEPVT
TTQL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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