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Report for CCDS57018.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
57018.1 |
Public |
Mus musculus |
16 |
Clec16a |
23 |
108 |
98 |
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Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 57018.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000155633.7 |
ENSMUSP00000123189.1 |
Accepted |
alive |
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NCBI |
NM_001204229.1 |
NP_001191158.1 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_001191158.1 |
1034 |
Q80U30-2 |
1034 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 57018.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (3105 nt): ATGTTTGGACGCTCACGGAGCTGGGTGGGCGGGGGCCACAGCAAGTCCTCCCGCAACATCCACTCCTTGG ACCACCTGAAGTACCTGTACCATGTTTTAACAAAAAACACCACTGTCACAGAACAAAATCGGAACCTGCT CGTGGAGACCATCCGTTCCATCACTGAGATCCTGATTTGGGGCGATCAAAATGACAGCTCTGTGTTTGAC TTCTTCCTGGAGAAGAATATGTTTGTTTTCTTCTTGAACATTCTGCGGCAGAAATCAGGCCGTTATGTGT GTGTGCAGCTGCTACAGACCTTGAACATTCTCTTTGAGAACATCAGCCACGAGACATCGCTCTATTATTT GCTGTCTAATAACTATGTAAACTCGATCATTGTCCATAAATTTGACTTTTCCGACGAGGAGATCATGGCG TATTACATATCGTTCCTGAAAACGCTTTCATTAAAGCTCAACAACCACACTGTCCATTTCTTTTACAATG AGCACACCAATGACTTTGCCCTGTACACAGAAGCCATCAAGTTCTTCAATCATCCCGAAAGCATGGTTCG AATTGCCGTGAGAACCATCACTTTGAATGTCTACAAAGTGGATAACCAGGCCATGCTGCACTACATCAGA GACAAAACCGCTGTCCCGTACTTCTCCAATTTGGTCTGGTTCATTGGGAGCCATGTGATCGAACTTGACA ACTGTGTGCAGACAGATGAGGAGCACCGGAATCGGGGGAAACTGAGTGACCTGGTGGCTGAGCACTTGGA CCACCTGCACTATCTCAACGACATCCTGATCATCAACTGCGAGTTCCTCAATGACGTACTCACCGACCAC CTGCTCAACAGGCTTTTCCTGCCGCTCTACGTGTACTCCCTGGAGAACCCCGACAAGGGAGGAGAACGGC CAAAAATCAGCCTGCCTGTGTCCCTCTATCTTCTCTCCCAGGTCTTCCTCATTATACATCACGCCCCGCT GGTGAACTCTCTGGCTGAAGTCATTCTGAATGGTGATCTATCTGAGACATACACAAAGCCTGCACAGGAT GTTCCCAGAAGTTCTGCCAAGCCCAGCATCCGGTGCTTCATTAAGCCCACTGAGACACTCGAGCGGTCCC TTGAGATGAACAAGCACAAGGGCAAGAAGCGGATGCAAAAGAGACCCAACTACAAAAACGTTGGGGAGGA GGAGGACGAGGAGAGAGGGTCTGCTGAAGATGCCCAGGAAGACGCTGAGAAGACTAAAGAGATTGAGATG GTGATCATGAAGCTTGGCAAGCTCTCAGAGGTGGCCGCTGCTGGGACCTCAGTGCAGGAGCAGAACACCA CAGACGAGGAGAAGAGCGCCGCCACGAACTCAGAGAATGCACAGTGGAGCAGACCCTTCCTGGATATGGT GTACCATGCCCTGGACAGCCCTGACGATGACTATCACGCCCTCTTCGTGCTCTGCCTCCTGTATGCCATG TCTCATAACAAAGGCATGGATCCTGAAAAACTAAAACGAATTCAGCTCCCAGTGCCAAGTGAAGCTGAGA AAACCACCTACAACCATCTGCTGGCCGAGAGGCTCATCAGGATCATGAACAATGCTGCTCAGCCAGATGG CAGGATCCGGTTGGCTACACTGGAGCTGAGCTGCCTGCTCCTGAAGCAGCAAGTACTGACCAGCTCTGGC TGTGTCATCAAGGATGTGCACCTGGCCTGTTTGGAGGGTGCAAGAGAAGAGAGTGTCCACCTTGTACGTC ATTTCTATAAGGGAGAAGAGATTTTCTTGGACATGTTTGAAGATGAGTACAGGAGCATGACAATAAAGCC CATGAATGTGGAGTATCTCATGATGGATGCTTCCATCCTCCTGCCCCCAACGGGCACTCCACTGACTGGC ATTGACTTTGTGAAGCGGCTGCCATGTGGTGATGTGGAGAAGACGAGGCGGGCCATCCGGGTATTCTTCA TGCTGCGTTCCCTGTCACTGCAGCTGCGAGGGGAACCTGAGACCCAGTTGCCACTGACTCGGGAGGAGGA CCTGATCAAAACAGATGATGTCTTGGATCTGAATAACAGTGACTTGATTGCATGCACAGTCATCACCAAG GATGGTGGTATGGTCCAGCGGTTCCTGGCTGTGGACATTTACCAGATGAGCCTGGTGGAGCCTGACGTAT CCAGACTTGGCTGGGGAGTGGTCAAGTTTGCTGGCCTTCTACAGGACATGCAGGTGACAGGAGTGGAGGA TGACAGCCGTGCCCTGAACATCACCATTCACAAGCCTGCCTCCAGCCCGCACTCTAAGCCCTTCCCTATC CTGCAGGCCACCTTCGTGTTCTCGGATCATATCCGCTGCATTATTGCCAAGCAGCGCCTGGCCAAGGGCC GCATCCAGGCCAGGCGCATGAAGATGCAGAGGATAGCCGCCCTTCTGGACCTCCCAATCCAGCCGACAAC AGAAGTCCTGGGATTTGGACTCTGCTCCTCCTCCTCCTCCTCCCAGCACCTGCCTTTCCGTTTCTATGAG CAGTGCCGCAGAGGCAGCAGTGACCCGACAGTGCAACGCTCTGTGTTTGCATCCGTAGACAAGGTGCCAG GCTTTGCTGTGGCCCAGTGCATAAACCAGCATAGCTCTCCATCCCTGTCATCACCGTCGCCACCATTTGC CAGTGGGAGCCCTGGTGGCAGTGGAAGCACCAGCCACTGTGACTCAGGAGGCTCTTCCTCTGCACCCTCA GCAACCCAGAGCCCGGCAGATGCCCCCACGACTCCAGAACAGCCTCAGCCTCACCTAGACCAGTCAGTGA TTGGGAATGAAATGGATGTCAACTCCAAGCCCAGCAAGAACTCATCGGCCAGGAGCTCTGAGGGGGAGAC AATGCACCTGTCCCCTAGCCTCCTTCCCGCCCAGCAGCCCACCATCTCCTTGCTCTACGAGGACACTGCT GACACACTGAGTGTCGAGTCACTGACCATTGTCCCCCCGGTCGATCCCCACAGCCTCCGAGCCCTCTCTG GCATCTCCCAGCTCCCCACACTGCCTGCAGCAGATACGGAGACCCCAGCTGAGGGTGCTGTAAACCCAGA GCCTGCGGAACCCACAGAGCACTGA
Translation (1034 aa): MFGRSRSWVGGGHSKSSRNIHSLDHLKYLYHVLTKNTTVTEQNRNLLVETIRSITEILIWGDQNDSSVFD FFLEKNMFVFFLNILRQKSGRYVCVQLLQTLNILFENISHETSLYYLLSNNYVNSIIVHKFDFSDEEIMA YYISFLKTLSLKLNNHTVHFFYNEHTNDFALYTEAIKFFNHPESMVRIAVRTITLNVYKVDNQAMLHYIR DKTAVPYFSNLVWFIGSHVIELDNCVQTDEEHRNRGKLSDLVAEHLDHLHYLNDILIINCEFLNDVLTDH LLNRLFLPLYVYSLENPDKGGERPKISLPVSLYLLSQVFLIIHHAPLVNSLAEVILNGDLSETYTKPAQD VPRSSAKPSIRCFIKPTETLERSLEMNKHKGKKRMQKRPNYKNVGEEEDEERGSAEDAQEDAEKTKEIEM VIMKLGKLSEVAAAGTSVQEQNTTDEEKSAATNSENAQWSRPFLDMVYHALDSPDDDYHALFVLCLLYAM SHNKGMDPEKLKRIQLPVPSEAEKTTYNHLLAERLIRIMNNAAQPDGRIRLATLELSCLLLKQQVLTSSG CVIKDVHLACLEGAREESVHLVRHFYKGEEIFLDMFEDEYRSMTIKPMNVEYLMMDASILLPPTGTPLTG IDFVKRLPCGDVEKTRRAIRVFFMLRSLSLQLRGEPETQLPLTREEDLIKTDDVLDLNNSDLIACTVITK DGGMVQRFLAVDIYQMSLVEPDVSRLGWGVVKFAGLLQDMQVTGVEDDSRALNITIHKPASSPHSKPFPI LQATFVFSDHIRCIIAKQRLAKGRIQARRMKMQRIAALLDLPIQPTTEVLGFGLCSSSSSSQHLPFRFYE QCRRGSSDPTVQRSVFASVDKVPGFAVAQCINQHSSPSLSSPSPPFASGSPGGSGSTSHCDSGGSSSAPS ATQSPADAPTTPEQPQPHLDQSVIGNEMDVNSKPSKNSSARSSEGETMHLSPSLLPAQQPTISLLYEDTA DTLSVESLTIVPPVDPHSLRALSGISQLPTLPAADTETPAEGAVNPEPAEPTEH
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