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Report for CCDS27422.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27422.1 Public Mus musculus 15 Osr2 23 108 98 CCDS HistoryNCBI Gene:107587Re-query CCDS DB by CCDS ID:27422.1Re-query CCDS DB by GeneID:107587See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27422.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022952.5 ENSMUSP00000022952.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022952.5Link to Ensembl Protein Viewer:ENSMUSP00000022952.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000022952Re-query CCDS DB by Protein ID:ENSMUSP00000022952
Original member Current member NCBI NM_054049.3 NP_473390.1 Accepted alive Link to Nucleotide Sequence:NM_054049.3Link to Protein Sequence:NP_473390.1Re-query CCDS DB by Nucleotide ID:NM_054049Re-query CCDS DB by Protein ID:NP_473390Link to BLAST:NP_473390.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_473390.1 276 Q91ZD1-2 276 100% 0 0

Chromosomal Locations for CCDS 27422.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 35300300 35300955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 35301912 35302011 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 35302819 35302893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (831 nt):
ATGGGGAGCAAGGCCCTGCCAGCTCCCATCCCACTGCACCCGTCACTGCAGCTCACCAATTACTCCTTCC
TGCAGGCAGTGAACACCTTCCCGGCCGCAGTGGACCACCTTCAGGGCCTCTACGGTCTCAGTGCGGTGCA
GACCATGCACATGAACCACTGGACGCTGGGGTACCCCAGTGTGCACGAGATCACCCGCTCCACCATCACG
GAGATGGCGGCTGCGCAGGGCCTCGTGGACGCTCGCTTCCCCTTCCCCTCGCTGCCCTTTGCCACCCACC
TGTTCCACCCCAAGCAGGGGGCCATTGCCCACGTCCTTCCAGCCCTACACAAGGACCGGCCCCGTTTTGA
CTTTGCCAACTTGGCGGTGGCCGCCACGCAAGAAGATCCTCCTAAAATGGGAGACCTGAGCAAGCTGAGC
CCAGGGCTGGGGAGCCCCATCTCGGGCCTCAGTAAACTGAACCCGGACAGAAAGCCCTCCCGAGGGAGAT
TGCCCTCCAAAACGAAAAAGGAGTTTATCTGCAAGTTTTGCGGCAGACACTTTACCAAATCATACAATTT
GCTCATTCACGAGAGGACCCACACAGACGAGAGGCCATACACCTGTGACATCTGCCACAAGGCATTTCGG
AGGCAAGATCACCTACGGGATCACAGGTATATCCATTCCAAAGAAAAGCCCTTCAAATGTCAGGAGTGTG
GGAAAGGATTCTGTCAGTCTAGGACCCTAGCAGTTCACAAAACTTTACATATGCAGACATCAAGCCCTAC
AGCTGCGAGCAGTGCGGCAAAGTGTTCAGGCGAAACTGCGATCTGCGGCGGCACAGCCTGA

Translation (276 aa):
MGSKALPAPIPLHPSLQLTNYSFLQAVNTFPAAVDHLQGLYGLSAVQTMHMNHWTLGYPSVHEITRSTIT
EMAAAQGLVDARFPFPSLPFATHLFHPKQGAIAHVLPALHKDRPRFDFANLAVAATQEDPPKMGDLSKLS
PGLGSPISGLSKLNPDRKPSRGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFR
RQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTAASSAAKCSGETAICGGTA


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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  VEGA Genome Browser

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