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Report for CCDS26777.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26777.1 Public Mus musculus 13 Plpp1 23 108 98 CCDS HistoryNCBI Gene:19012Re-query CCDS DB by CCDS ID:26777.1Re-query CCDS DB by GeneID:19012See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26777.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000070951.7 ENSMUSP00000064423.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000070951.7Link to Ensembl Protein Viewer:ENSMUSP00000064423.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000070951Re-query CCDS DB by Protein ID:ENSMUSP00000064423
Original member Current member NCBI NM_008903.2 NP_032929.1 Accepted alive Link to Nucleotide Sequence:NM_008903.2Link to Protein Sequence:NP_032929.1Re-query CCDS DB by Nucleotide ID:NM_008903Re-query CCDS DB by Protein ID:NP_032929Link to BLAST:NP_032929.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032929.1 283 Q61469-1 283 100% 0 0

Chromosomal Locations for CCDS 26777.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 112801209 112801266 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 112851403 112851554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 112856746 112857026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 112859644 112859701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 112866796 112866972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 112867443 112867568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (852 nt):
ATGTTCGACAAGACGCGGCTGCCGTACGTGGCCCTCGATGTGATTTGCGTGTTGCTGGCTGGATTGCCTT
TTGCAATTCTTACTTCAAGGCATACCCCCTTCCAGCGAGGAATATTCTGTAATGATGACTCCATCAAGTA
CCCTTACAAGGAAGACACCATACCTTATGCCTTATTAGGTGGAATAGTCATTCCATTCTGTATTATCGTT
ATGAGTATTGGAGAATCTCTGTCTGTTTACTTTAATGTCTTGCATTCGAATTCCTTTGTCGGCAATCCCT
ACATAGCCACCATTTACAAAGCCGTCGGAGCCTTTTTGTTCGGAGTCTCAGCTAGTCAGTCCTTGACTGA
CATCGCTAAGTATACTATAGGCAGTTTGCGGCCGCACTTCTTGGCTATCTGTAACCCAGACTGGTCAAAA
ATCAACTGCAGTGATGGCTATATTGAGGACTACATATGTCAAGGGAATGAAGAGAAAGTCAAGGAGGGCA
GGTTGTCTTTCTACTCGGGACACTCTTCATTCTCTATGTACTGCATGCTGTTTGTCGCACTTTATCTTCA
AGCCAGGATGAAGGGAGACTGGGCAAGACTCTTACGACCCATGCTCCAGTTTGGGCTCATTGCTTTTTCC
ATATATGTGGGCCTTTCTCGAGTGTCTGACTACAAACACCACTGGAGTGACGTCACAGTTGGACTCATTC
AGGGAGCTGCTATGGCTATACTGGTTGCTTTGTATGTATCCGATTTCTTCAAGGACACACATTCTTACAA
AGAGAGAAAGGAAGAGGATCCACACACGACTCTCCATGAAACCGCCAGTTCACGGAACTACTCAACCAAT
CACGAGCCCTGA

Translation (283 aa):
MFDKTRLPYVALDVICVLLAGLPFAILTSRHTPFQRGIFCNDDSIKYPYKEDTIPYALLGGIVIPFCIIV
MSIGESLSVYFNVLHSNSFVGNPYIATIYKAVGAFLFGVSASQSLTDIAKYTIGSLRPHFLAICNPDWSK
INCSDGYIEDYICQGNEEKVKEGRLSFYSGHSSFSMYCMLFVALYLQARMKGDWARLLRPMLQFGLIAFS
IYVGLSRVSDYKHHWSDVTVGLIQGAAMAILVALYVSDFFKDTHSYKERKEEDPHTTLHETASSRNYSTN
HEP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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