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Report for CCDS15281.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15281.1 Public Mus musculus 1 Cdk18 23 108 98 CCDS HistoryNCBI Gene:18557Re-query CCDS DB by CCDS ID:15281.1Re-query CCDS DB by GeneID:18557See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15281.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000027697.11 ENSMUSP00000027697.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000027697.11Link to Ensembl Protein Viewer:ENSMUSP00000027697.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000027697Re-query CCDS DB by Protein ID:ENSMUSP00000027697
Original member Current member EBI ENSMUST00000112362.2 ENSMUSP00000107981.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000112362.2Link to Ensembl Protein Viewer:ENSMUSP00000107981.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000112362Re-query CCDS DB by Protein ID:ENSMUSP00000107981
Original member Current member NCBI NM_008795.2 NP_032821.1 Accepted alive Link to Nucleotide Sequence:NM_008795.2Link to Protein Sequence:NP_032821.1Re-query CCDS DB by Nucleotide ID:NM_008795Re-query CCDS DB by Protein ID:NP_032821Link to BLAST:NP_032821.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032821.1 451 Q04899 451 100% 0 0

Chromosomal Locations for CCDS 15281.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 132114936 132114970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 132115465 132115542 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 132115862 132115952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 132116447 132116489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 132116596 132116701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 132116884 132116981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 132117482 132117602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 132117750 132117873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 132118521 132118583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 132118850 132118944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 132119100 132119214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 132119968 132120024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 132121448 132121573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 132122037 132122116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 132122312 132122435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1356 nt):
ATGAACAAGATGAAGAACTTCAAGCGAAGGCTTTCCCTGTCCGTGCCCCGCCCAGAGACCATTGAGGAGT
CGTTGGCTGAGTTCACTGAGCAGTTCAACCAACTCCACACTCAGACGAATGAGGATGGCACAGATGAGCC
TGAGCAGCTGTCTCCTGGCATGCAGTATCAACAACGGCAGAACCAGCGCCGATTCTCCATGGAGGACCTC
AACAAGAGGCTCTCTCTGCCCATGGACATCCGCCTACCCCAGGAATTCCTGCAGAAGCTACAGCTGGAGA
ACCCAGGGCTGCCCAAGCCTCTCACCCGCATGTCCCGCCGTGCCTCCCTGTCAGATATCGGCTTTGGGAA
ACTGGAAACATATGTGAAACTGGACAAACTGGGGGAGGGTACCTATGCCACCGTCTTCAAGGGACGCAGC
AAGCTGACAGAGAACCTCGTGGCCCTGAAGGAGATCCGGCTGGAGCATGAGGAAGGGGCGCCCTGCACTG
CTATTCGAGAGGTGTCTCTGCTGAAGGACCTGAAACACGCCAATATTGTGACCCTGCATGACCTCATTCA
CACAGATCGGTCCCTCACCCTGGTGTTTGAGTACCTGGACAGTGACCTGAAACAGTACCTAGACCACTGT
GGGAACCTCATGAACATGCACAATGTCAAGATATTCATGTTCCAGCTGCTCCGGGGTCTGGCCTACTGCC
ACCACCGCAAGATCCTGCACCGGGACCTGAAGCCCCAGAACCTACTCATCAATGAGAGGGGCGAGCTGAA
GCTGGCCGACTTTGGCCTGGCCCGGGCCAAATCAGTGCCTACAAAGACCTATTCCAATGAGGTGGTGACC
CTCTGGTACAGGCCCCCAGATGTGCTGCTGGGATCCACAGAGTACTCCACCCCCATTGACATGTGGGGCG
TGGGCTGCATCCTCTATGAGATGGCCACCGGCAAGCCCCTCTTCCCGGGCTCTACTGTCAAGGAGGAGTT
GCACCTCATCTTCCGTCTCCTAGGGACACCTACAGAAGAGTCGTGGCCGGGTGTGACGTCCATCTCTGAG
TTTCGAGCCTACAACTTCCCCCGATACCTACCACAGCCACTGCTCAGCCACGCCCCCAGGTTGGATACTG
AAGGCATCAACCTCCTGAGCAGCCTCCTCCTGTATGAATCCAAGAGTCGCATGTCAGCAGAGGCAGCCCT
CAATCACCCCTACTTCCAGTCTCTCGGAGACCGAGTTCATCAGCTCCATGACACTGCCTCCATCTTCTCC
CTGAAGGAGATCCAGCTCCAAAAGGACCCAGGCTATCGTGGCCTGGCCTTCCAGCACCCAGGGCGAGGGA
AGAGCCGGCGGCAGAGCATCTTCTGA

Translation (451 aa):
MNKMKNFKRRLSLSVPRPETIEESLAEFTEQFNQLHTQTNEDGTDEPEQLSPGMQYQQRQNQRRFSMEDL
NKRLSLPMDIRLPQEFLQKLQLENPGLPKPLTRMSRRASLSDIGFGKLETYVKLDKLGEGTYATVFKGRS
KLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDLIHTDRSLTLVFEYLDSDLKQYLDHC
GNLMNMHNVKIFMFQLLRGLAYCHHRKILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEVVT
LWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGKPLFPGSTVKEELHLIFRLLGTPTEESWPGVTSISE
FRAYNFPRYLPQPLLSHAPRLDTEGINLLSSLLLYESKSRMSAEAALNHPYFQSLGDRVHQLHDTASIFS
LKEIQLQKDPGYRGLAFQHPGRGKSRRQSIF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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