NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS14507.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14507.1 Public Homo sapiens X TCEAL9 24 110 108 CCDS HistoryNCBI Gene:51186Re-query CCDS DB by CCDS ID:14507.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14507.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000372656.5 ENSP00000361740.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000372656.5Link to Ensembl Protein Viewer:ENSP00000361740.3Re-query CCDS DB by Nucleotide ID:ENST00000372656Re-query CCDS DB by Protein ID:ENSP00000361740
Original member Current member EBI ENST00000372661.6 ENSP00000361745.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000372661.6Link to Ensembl Protein Viewer:ENSP00000361745.3Re-query CCDS DB by Nucleotide ID:ENST00000372661Re-query CCDS DB by Protein ID:ENSP00000361745
Original member Current member EBI ENST00000646896.1 ENSP00000496422.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000646896.1Link to Ensembl Protein Viewer:ENSP00000496422.1Re-query CCDS DB by Nucleotide ID:ENST00000646896Re-query CCDS DB by Protein ID:ENSP00000496422
Original member Current member NCBI NM_001006612.2 NP_001006613.1 Accepted alive Link to Nucleotide Sequence:NM_001006612.2Link to Protein Sequence:NP_001006613.1Re-query CCDS DB by Nucleotide ID:NM_001006612Re-query CCDS DB by Protein ID:NP_001006613Link to BLAST:NP_001006613.1
Original member Current member NCBI NM_001006613.2 NP_001006614.1 Accepted alive Link to Nucleotide Sequence:NM_001006613.2Link to Protein Sequence:NP_001006614.1Re-query CCDS DB by Nucleotide ID:NM_001006613Re-query CCDS DB by Protein ID:NP_001006614Link to BLAST:NP_001006614.1
Original member Current member NCBI NM_001006614.2 NP_001006615.1 Accepted alive Link to Nucleotide Sequence:NM_001006614.2Link to Protein Sequence:NP_001006615.1Re-query CCDS DB by Nucleotide ID:NM_001006614Re-query CCDS DB by Protein ID:NP_001006615Link to BLAST:NP_001006615.1
Original member Current member NCBI NM_016303.3 NP_057387.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016303.3Link to Protein Sequence:NP_057387.1Re-query CCDS DB by Nucleotide ID:NM_016303Re-query CCDS DB by Protein ID:NP_057387Link to BLAST:NP_057387.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001006613.1 104 Q9UHQ7 104 100% 0 0
NP_001006614.1 104 Q9UHQ7 104 100% 0 0
NP_001006615.1 104 Q9UHQ7 104 100% 0 0
NP_057387.1 104 Q9UHQ7 104 100% 0 0

Chromosomal Locations for CCDS 14507.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 103357685 103357999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (315 nt):
ATGAAATCCTGTCAAAAAATGGAAGGAAAACCAGAAAATGAGAGTGAACCAAAGCATGAGGAAGAGCCAA
AGCCTGAGGAAAAGCCAGAAGAGGAGGAGAAGCTAGAGGAGGAGGCCAAAGCAAAAGGAACTTTTAGAGA
AAGGCTGATTCAATCTCTCCAGGAGTTTAAAGAAGATATACACAACAGGCATTTAAGCAATGAAGATATG
TTTAGAGAAGTGGATGAAATAGATGAGATAAGGAGAGTCAGAAACAAACTTATAGTGATGCGTTGGAAGG
TTAATCGAAACCATCCTTACCCCTATTTAATGTAG

Translation (104 aa):
MKSCQKMEGKPENESEPKHEEEPKPEEKPEEEEKLEEEAKAKGTFRERLIQSLQEFKEDIHNRHLSNEDM
FREVDEIDEIRRVRNKLIVMRWKVNRNHPYPYLM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH