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Report for CCDS14262.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14262.1 Public Homo sapiens X NDP 24 110 108 CCDS HistoryNCBI Gene:4693Re-query CCDS DB by CCDS ID:14262.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14262.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000647044.1 ENSP00000495811.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000647044.1Link to Ensembl Protein Viewer:ENSP00000495811.1Re-query CCDS DB by Nucleotide ID:ENST00000647044Re-query CCDS DB by Protein ID:ENSP00000495811
Original member Current member EBI ENST00000642620.1 ENSP00000495972.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000642620.1Link to Ensembl Protein Viewer:ENSP00000495972.1Re-query CCDS DB by Nucleotide ID:ENST00000642620Re-query CCDS DB by Protein ID:ENSP00000495972
Original member Current member NCBI NM_000266.4 NP_000257.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_000266.4Link to Protein Sequence:NP_000257.1Re-query CCDS DB by Nucleotide ID:NM_000266Re-query CCDS DB by Protein ID:NP_000257Link to BLAST:NP_000257.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000257.1 133 Q00604 133 100% 0 0

Chromosomal Locations for CCDS 14262.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 43949799 43950026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 43958472 43958645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (402 nt):
ATGAGAAAACATGTACTAGCTGCATCCTTTTCTATGCTCTCCCTGCTGGTGATAATGGGAGATACAGACA
GTAAAACGGACAGCTCATTCATAATGGACTCGGACCCTCGACGCTGCATGAGGCACCACTATGTGGATTC
TATCAGTCACCCATTGTACAAGTGTAGCTCAAAGATGGTGCTCCTGGCCAGGTGCGAGGGGCACTGCAGC
CAGGCGTCACGCTCCGAGCCTTTGGTGTCGTTCAGCACTGTCCTCAAGCAACCCTTCCGTTCCTCCTGTC
ACTGCTGCCGGCCCCAGACTTCCAAGCTGAAGGCACTGCGGCTGCGATGCTCAGGGGGCATGCGACTCAC
TGCCACCTACCGGTACATCCTCTCCTGTCACTGCGAGGAATGCAATTCCTGA

Translation (133 aa):
MRKHVLAASFSMLSLLVIMGDTDSKTDSSFIMDSDPRRCMRHHYVDSISHPLYKCSSKMVLLARCEGHCS
QASRSEPLVSFSTVLKQPFRSSCHCCRPQTSKLKALRLRCSGGMRLTATYRYILSCHCEECNS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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