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Report for CCDS21873.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21873.1 Public Mus musculus 7 Zfp629 23 108 98 CCDS HistoryNCBI Gene:320683Re-query CCDS DB by CCDS ID:21873.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21873.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000058038.11 ENSMUSP00000053760.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000058038.11Link to Ensembl Protein Viewer:ENSMUSP00000053760.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000058038Re-query CCDS DB by Protein ID:ENSMUSP00000053760
Original member Current member EBI ENSMUST00000084564.9 ENSMUSP00000081612.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000084564.9Link to Ensembl Protein Viewer:ENSMUSP00000081612.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000084564Re-query CCDS DB by Protein ID:ENSMUSP00000081612
Original member Current member EBI ENSMUST00000122066.7 ENSMUSP00000113903.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000122066.7Link to Ensembl Protein Viewer:ENSMUSP00000113903.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000122066Re-query CCDS DB by Protein ID:ENSMUSP00000113903
Original member NCBI NM_001362196.1 NP_001349125.1 Updated not alive Link to Nucleotide Sequence:NM_001362196.1Link to Protein Sequence:NP_001349125.1Re-query CCDS DB by Nucleotide ID:NM_001362196Re-query CCDS DB by Protein ID:NP_001349125
Current member NCBI NM_001362196.2 NP_001349125.1 Accepted alive Link to Nucleotide Sequence:NM_001362196.2Link to Protein Sequence:NP_001349125.1Re-query CCDS DB by Nucleotide ID:NM_001362196Re-query CCDS DB by Protein ID:NP_001349125Link to BLAST:NP_001349125.1
Original member NCBI NM_001362197.1 NP_001349126.1 Updated not alive Link to Nucleotide Sequence:NM_001362197.1Link to Protein Sequence:NP_001349126.1Re-query CCDS DB by Nucleotide ID:NM_001362197Re-query CCDS DB by Protein ID:NP_001349126
Current member NCBI NM_001362197.2 NP_001349126.1 Accepted alive Link to Nucleotide Sequence:NM_001362197.2Link to Protein Sequence:NP_001349126.1Re-query CCDS DB by Nucleotide ID:NM_001362197Re-query CCDS DB by Protein ID:NP_001349126Link to BLAST:NP_001349126.1
Original member NCBI NM_177226.6 NP_796200.1 Updated not alive Link to Nucleotide Sequence:NM_177226.6Link to Protein Sequence:NP_796200.1Re-query CCDS DB by Nucleotide ID:NM_177226Re-query CCDS DB by Protein ID:NP_796200
Current member NCBI NM_177226.7 NP_796200.1 Accepted alive Link to Nucleotide Sequence:NM_177226.7Link to Protein Sequence:NP_796200.1Re-query CCDS DB by Nucleotide ID:NM_177226Re-query CCDS DB by Protein ID:NP_796200Link to BLAST:NP_796200.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001349125.1 867 Q6A085 867 100% 0 0
NP_001349126.1 867 Q6A085 867 100% 0 0
NP_796200.1 867 Q6A085 867 100% 0 0

Chromosomal Locations for CCDS 21873.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 127610032 127612562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127612667 127612739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2604 nt):
ATGGAGCCTGAGACGGTGCTGTGGGGCCCGGATCTGCAGGGTCCTGAAGAGAGCCAGAATGAGGCTCATA
GAGGTGCTGGAAGTGGGAACGAAGAGGAGAGCCCTCAGCAGGAAAGTTCTGGGGAGGAGATCATCCTGGG
AGATCCGGCTCAGAGTCCAGAATCCAAGGACCCATCAGAGATGCCCCTGGAGAGCCCCTCCCAGGATGCC
TCAGCCCCTCAGGATTCCCCAACCCCCCTGGGTTCTTCCCCCTTAGATCACCAGACCCCTATGGACCCAT
CAGCCCCCGAGGTAGTCCCTTCCCCGTCAGAGTGGACCAAGGCCTGTGAGACCAATTGGCAGTGGGGAAC
CCTCACCCCCTGGAACAGCACACCTGTAGTCACTGCCAGTGAACCCAGCCTGCGGGAGCTGGTGCAGGGA
CGCCCATCTGGGGCCGAGAAGCCATACATCTGCAACGAGTGTGGCAAGAGCTTTAGCCAGTGGTCCAAAC
TGCTGCGGCACCAGCGAATCCACACGGGGGAGCGGCCCAACACGTGCTCAGAGTGCGGCAAGAGCTTCAC
GCAGAGCTCGCACCTGGTGCAGCACCAGCGCACACACACAGGCGAGAAGCCTTACAAGTGCCCCGACTGT
GGCAAGTGCTTCAGCTGGAGCTCCAATCTAGTGCAGCACCAGCGCACGCACACGGGCGAGAAGCCCTACA
AGTGCACGGAGTGCGAGAAAGCCTTCACACAAAGCACCAACCTCATCAAGCACCAGCGCTCCCACACCGG
GGAGAAGCCCTACAAGTGTGGCGAGTGCCGACGTGCTTTCTACCGCAGCTCGGACCTCATCCAGCACCAG
GCCACGCACACAGGTGAGAAGCCCTACAAGTGCCCGGAGTGCGGCAAGCGCTTTGGCCAGAATCATAACC
TGCTCAAGCACCAGAAGATCCATGCAGGCGAGAAGCCCTATCGCTGCACCGAGTGCGGCAAGAGTTTCAT
CCAGAGCTCGGAGCTGACGCAGCACCAGCGCACACACACCGGGGAGAAGCCCTACGAGTGCCTGGAGTGT
GGCAAGAGTTTCGGCCACAGCTCCACGCTCATCAAGCACCAGAGGACACATTTGCGCGAGGATCCCTTCA
AGTGCCCCGTCTGTGGCAAGACCTTCACACTGAGTGCCACCCTGCTGCGCCATCAGCGCACGCACACGGG
CGAGAGGCCCTACAAGTGCCCCGAGTGCGGGAAGAGCTTCAGTGTGAGCTCTAACCTCATCAACCACCAG
CGTATCCACCGTGGGGAGAGGCCGTACATCTGCGCCGACTGCGGCAAAAGCTTTATCATGAGCTCCACTC
TGATCCGCCACCAGCGCATCCACACCGGCGAGAAGCCCTATAAGTGCTCTGACTGTGGCAAGAGTTTCAT
TCGCAGCTCGCACCTCATCCAGCATCGCCGCACGCACACGGGCGAGAAGCCCTACAAGTGCCCGGAGTGT
GGCAAGAGTTTCAGCCAGAGCTCCAACCTCATCACGCACGTCCGCACACACATGGACGAGAACCTCTTCG
TGTGCTCCGACTGCGGCAAGGCCTTCCTGGAGGCGCAAGAGCTGGAGCAGCACCGCGTGATCCACGAGAG
AGGCAAGACACCTGCCCGGAGAGCTCAGGGTGACAGCTTGCTAGGGTTTGGGGATCCTGCCCTGATGACT
CCGCCACCAGGAGCCAAACCTCACAAGTGTCTGGTCTGTGGAAAGGGCTTCAATGATGAAGGCATCTTCA
TGCAGCACCAGAGGATTCATATCGGAGAAAACCCCTACAAAAATGCAGATGGCCTCATAACACACCCAGC
CCCCAAGCCTCAACAGTTACGCCCCTCCAGGCTCCCCTTTGGAGGCAATTCACACCCAGGTGCTTCAGAG
AGCAGAGCTGACCCCCCAGGACAGCCCTCGAAAGTCCCCGAGAGTCAGGAGGGCTCAGGCCAAAGGCCAG
GCCAACCCTCTCCTAAGTGCTATGTTTGTTCCCACTGTGGAGAAAGCTTCCTTGATAGGGCTGTGCTCCT
GCAACATCAGCTCACTCACGGGAATGAAAAGCCCTTTCTCTTTCCTGAGTGTAGGACTGGCCGTGGGGAA
GGGGCAGGACCCAGCCCCTTCCTAAACGCAAAGCCCTTTAAATGCCCAGAGTGCAAAAAAAGCTTTGGCC
TCAGCTCTGAGCTGTTGCAGCACCAGAAAGTCCATGCGGGTGGGAAGTCCCAGAAGAGCTCTGAGCTGGG
AAAGAGCTCTTCAGTCCTGCTGGAGCATCTCAGGAGCCCTTTGGGAGCCAGGCCCTACAGCTGCTCTGAT
TGTGGGGCCTCTTTCCTCGATCGACTAGCTCTTACACGACATCAGGAAACCCATACTCACGAAAGGGCCT
CCACTCCTGAGGACACCCCTTCAGAGTCAGCCACATTGTCCACAAACCAGGAAGATGAGGGAGAGGCCTC
TACCCCCCCAAAAAGCAGCAGCCACGGGGAAGAGGAAAGTCCCAAAACTGTTTCGGAGAAAAAGCCCTTT
CTGTGCCCCGAGTGTGGAGATGGCTTCACGGAGGTTGCCACTCTCCTCCTCCATAGGAGCTGTCACCCAG
GGGTCTCCCTGTGA

Translation (867 aa):
MEPETVLWGPDLQGPEESQNEAHRGAGSGNEEESPQQESSGEEIILGDPAQSPESKDPSEMPLESPSQDA
SAPQDSPTPLGSSPLDHQTPMDPSAPEVVPSPSEWTKACETNWQWGTLTPWNSTPVVTASEPSLRELVQG
RPSGAEKPYICNECGKSFSQWSKLLRHQRIHTGERPNTCSECGKSFTQSSHLVQHQRTHTGEKPYKCPDC
GKCFSWSSNLVQHQRTHTGEKPYKCTECEKAFTQSTNLIKHQRSHTGEKPYKCGECRRAFYRSSDLIQHQ
ATHTGEKPYKCPECGKRFGQNHNLLKHQKIHAGEKPYRCTECGKSFIQSSELTQHQRTHTGEKPYECLEC
GKSFGHSSTLIKHQRTHLREDPFKCPVCGKTFTLSATLLRHQRTHTGERPYKCPECGKSFSVSSNLINHQ
RIHRGERPYICADCGKSFIMSSTLIRHQRIHTGEKPYKCSDCGKSFIRSSHLIQHRRTHTGEKPYKCPEC
GKSFSQSSNLITHVRTHMDENLFVCSDCGKAFLEAQELEQHRVIHERGKTPARRAQGDSLLGFGDPALMT
PPPGAKPHKCLVCGKGFNDEGIFMQHQRIHIGENPYKNADGLITHPAPKPQQLRPSRLPFGGNSHPGASE
SRADPPGQPSKVPESQEGSGQRPGQPSPKCYVCSHCGESFLDRAVLLQHQLTHGNEKPFLFPECRTGRGE
GAGPSPFLNAKPFKCPECKKSFGLSSELLQHQKVHAGGKSQKSSELGKSSSVLLEHLRSPLGARPYSCSD
CGASFLDRLALTRHQETHTHERASTPEDTPSESATLSTNQEDEGEASTPPKSSSHGEEESPKTVSEKKPF
LCPECGDGFTEVATLLLHRSCHPGVSL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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