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Report for CCDS3931.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3931.1 Public Homo sapiens 5 TTC33 24 110 108 CCDS HistoryNCBI Gene:23548Re-query CCDS DB by CCDS ID:3931.1See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3931.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000337702.5 ENSP00000338533.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000337702.5Link to Ensembl Protein Viewer:ENSP00000338533.4Re-query CCDS DB by Nucleotide ID:ENST00000337702Re-query CCDS DB by Protein ID:ENSP00000338533
Original member Current member NCBI NM_012382.3 NP_036514.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012382.3Link to Protein Sequence:NP_036514.1Re-query CCDS DB by Nucleotide ID:NM_012382Re-query CCDS DB by Protein ID:NP_036514Link to BLAST:NP_036514.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036514.1 262 Q6PID6 262 100% 0 0

Chromosomal Locations for CCDS 3931.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 40716145 40716498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 40728345 40728476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 40730262 40730343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 40746798 40747018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (789 nt):
ATGGCTTCCTTTGGGTGGAAGAGGAAAATTGGTGAGAAGGTCTCAAAGGTCACTTCCCAGCAGTTTGAAG
CTGAAGCTGCTGATGAGAAGGATGTAGTTGACAACGATGAAGGGAACTGGCTTCATGCCATTAAACGTAG
GAAAGAAATTCTTCTTGAAGGCTGTGCTGAGAAAAGTAAACAGCTGAAGGATGAAGGAGCCAGTTTGGCT
GAAAATAAAAGATATCGGGAGGCAATTCAGAAGTGGGATGAAGCACTACAGTTAACTCCAAATGATGCTA
CCCTATACGAGATGAAATCACAGGTGCTAATGTCTCTTCATGAAATGTTCCCAGCAGTACATGCAGCAGA
AATGGCCGTCCAGCAAAATCCACATTCATGGGAGTCTTGGCAGACTTTGGGACGTGCTCAACTTGGTTTA
GGAGAGATAATCCTGGCAATTCGAAGTTTTCAAGTAGCCCTTCACATCTATCCAATGAACCCTGAAATAT
GGAAAGAAGACCTCTCTTGGGCAAGAACGCTCCAGGAGCAGCAGAAGGTAGCACAGAGGATTAAAAAAAG
TGAAGCACCAGCTGAAGTAACACACTTTTCACCAAAGTCAATTCCAGACTATGACTTTGAAAGTGATGAG
ATTGTTGCTGTTTGTGCAGCTATTGCTGAGAAAGAGAAGACAGTTTCAGCAAATAAAACAATGGTTATTG
TGTCTGCTTCTGGGGCCATAGAGACTGTAACTGAAAAGGAGGATGGTGCTACACCACCAGATGGCTCTGT
TTTTATCAAAGCCCGATGA

Translation (262 aa):
MASFGWKRKIGEKVSKVTSQQFEAEAADEKDVVDNDEGNWLHAIKRRKEILLEGCAEKSKQLKDEGASLA
ENKRYREAIQKWDEALQLTPNDATLYEMKSQVLMSLHEMFPAVHAAEMAVQQNPHSWESWQTLGRAQLGL
GEIILAIRSFQVALHIYPMNPEIWKEDLSWARTLQEQQKVAQRIKKSEAPAEVTHFSPKSIPDYDFESDE
IVAVCAAIAEKEKTVSANKTMVIVSASGAIETVTEKEDGATPPDGSVFIKAR


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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