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Report for CCDS32673.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32673.1 Public Homo sapiens 17 SPPL2C 24 110 108 CCDS HistoryNCBI Gene:162540Re-query CCDS DB by CCDS ID:32673.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32673.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000329196.7 ENSP00000332488.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000329196.7Link to Ensembl Protein Viewer:ENSP00000332488.5Re-query CCDS DB by Nucleotide ID:ENST00000329196Re-query CCDS DB by Protein ID:ENSP00000332488
Original member Current member NCBI NM_175882.3 NP_787078.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_175882.3Link to Protein Sequence:NP_787078.2Re-query CCDS DB by Nucleotide ID:NM_175882Re-query CCDS DB by Protein ID:NP_787078Link to BLAST:NP_787078.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_787078.2 684 Q8IUH8 684 100% 0 0

Chromosomal Locations for CCDS 32673.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 45844907 45846961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2055 nt):
ATGGCGTGCCTGGGCTTCCTCCTCCCCGTGGGCTTCCTCCTCCTCATCAGCACCGTGGCCGGGGGAAAGT
ACGGCGTGGCCCACGTGGTGTCGGAGAATTGGAGCAAGGACTACTGTATCCTGTTCAGCTCCGACTACAT
CACCCTCCCCCGGGACCTGCACCACGCCCCACTCCTGCCCCTGTATGATGGCACCAAGGCACCCTGGTGC
CCGGGTGAGGATTCCCCCCACCAGGCCCAGCTCCGCTCCCCCAGCCAGCGGCCCCTCCGCCAGACCACTG
CCATGGTCATGAGGGGTAACTGCAGCTTCCACACGAAAGGCTGGCTGGCTCAGGGCCAAGGTGCCCACGG
GCTGCTCATCGTGAGCCGGGTCAGTGACCAACAGTGCTCAGACACCACCCTGGCACCCCAGGATCCCCGC
CAGCCCCTGGCAGACCTCACCATCCCTGTGGCTATGCTCCACTATGCTGACATGCTGGACATCCTCAGCC
ACACTCGTGGGGAGGCCGTCGTCCGCGTGGCCATGTACGCACCCCCAGAGCCCATCATCGACTACAACAT
GCTGGTCATCTTCATCCTGGCTGTGGGCACAGTGGCTGCAGGCGGCTACTGGGCCGGCCTGACCGAAGCC
AACCGGCTACAGCGGCGCCGTGCCCGAAGAGGAGGGGGGTCTGGTGGTCACCATCAGCTGCAGGAAGCTG
CAGCAGCTGAGGGAGCCCAGAAGGAAGATAATGAGGACATCCCAGTGGACTTCACGCCGGCCATGACAGG
CGTGGTGGTCACCCTGTCCTGCTCGCTCATGCTGCTGCTCTACTTCTTCTATGACCACTTTGTCTATGTC
ACCATTGGGATCTTTGGCCTGGGTGCTGGCATTGGCCTCTACAGCTGCCTGTCACCCCTGGTGTGCCGCC
TGTCCCTGCGGCAATACCAGAGGCCTCCGCACAGCCTCTGGGCCTCTCTGCCGCTGCCTCTGCTGCTGCT
GGCGAGCCTGTGCGCAACCGTGATCATCTTCTGGGTGGCCTACCGCAATGAGGACCGCTGGGCGTGGCTC
CTGCAGGACACACTGGGCATTTCCTACTGCCTGTTCGTCCTGCACCGTGTGCGGCTGCCCACTCTCAAGA
ACTGCTCCTCCTTCCTGCTGGCCCTGCTGGCCTTTGATGTCTTCTTTGTCTTCGTCACCCCCTTCTTCAC
CAAAACCGGTGAGAGCATCATGGCGCAGGTTGCCTTGGGCCCTGCAGAGTCTTCAAGCCATGAGAGGCTG
CCCATGGTACTCAAAGTGCCCCGGCTAAGAGTCTCCGCCTTGACCCTGTGCAGCCAGCCCTTCTCCATCC
TTGGCTTCGGTGACATTGTGGTCCCCGGCTTCCTGGTTGCTTACTGTTGCCGCTTTGATGTGCAAGTCTG
CTCCCGTCAGATCTACTTCGTGGCCTGCACCGTGGCCTATGCTGTGGGCCTGCTGGTCACATTCATGGCC
ATGGTCCTCATGCAGATGGGCCAACCTGCCTTGCTCTACCTAGTGTCCAGCACCCTGCTCACCAGCCTGG
CTGTGGCTGCCTGCCGCCAAGAGCTCAGCCTCTTCTGGACTGGCCAGGGCAGAGCTAAGATGTGTGGGCT
CGGCTGTGCCCCTTCAGCTGGCTCTAGGCAGAAGCAGGAGGGCGCAGCAGATGCCCACACAGCCAGCACA
CTTGAGAGAGGCACCAGCCGAGGAGCAGGGGACTTAGACAGCAACCCTGGAGAAGACACCACTGAGATTG
TCACCATATCTGAGAATGAAGCCACCAATCCAGAGGACCGCAGTGATAGCTCCGAGGGCTGGAGTGACGC
CCACTTGGATCCTAATGAGCTGCCCTTCATCCCCCCTGGGGCCTCGGAGGAGCTGATGCCACTGATGCCA
ATGGCCATGCTGATCCCACTCATGCCCCTGATGCCCCCGCCCTCAGAGCTGGGCCATGTCCATGCCCAGG
CCCAGGCCCACGAGACTGGCCTGCCCTGGGCGGGACTCCACAAGAGGAAGGGTTTGAAAGTAAGAAAGAG
CATGTCGACCCAGGCTCCCTTGTGA

Translation (684 aa):
MACLGFLLPVGFLLLISTVAGGKYGVAHVVSENWSKDYCILFSSDYITLPRDLHHAPLLPLYDGTKAPWC
PGEDSPHQAQLRSPSQRPLRQTTAMVMRGNCSFHTKGWLAQGQGAHGLLIVSRVSDQQCSDTTLAPQDPR
QPLADLTIPVAMLHYADMLDILSHTRGEAVVRVAMYAPPEPIIDYNMLVIFILAVGTVAAGGYWAGLTEA
NRLQRRRARRGGGSGGHHQLQEAAAAEGAQKEDNEDIPVDFTPAMTGVVVTLSCSLMLLLYFFYDHFVYV
TIGIFGLGAGIGLYSCLSPLVCRLSLRQYQRPPHSLWASLPLPLLLLASLCATVIIFWVAYRNEDRWAWL
LQDTLGISYCLFVLHRVRLPTLKNCSSFLLALLAFDVFFVFVTPFFTKTGESIMAQVALGPAESSSHERL
PMVLKVPRLRVSALTLCSQPFSILGFGDIVVPGFLVAYCCRFDVQVCSRQIYFVACTVAYAVGLLVTFMA
MVLMQMGQPALLYLVSSTLLTSLAVAACRQELSLFWTGQGRAKMCGLGCAPSAGSRQKQEGAADAHTAST
LERGTSRGAGDLDSNPGEDTTEIVTISENEATNPEDRSDSSEGWSDAHLDPNELPFIPPGASEELMPLMP
MAMLIPLMPLMPPPSELGHVHAQAQAHETGLPWAGLHKRKGLKVRKSMSTQAPL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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